Factsheet for Zm00001d034293_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037310_P001	Maize	plastid	62.44	45.39
Zm00001d017794_P001	Maize	plastid	61.99	36.73
Zm00001d038116_P001	Maize	plastid	51.13	34.88
Zm00001d045078_P001	Maize	extracellular, golgi	52.94	28.33
Zm00001d037087_P001	Maize	endoplasmic reticulum	52.94	26.59
Zm00001d018350_P001	Maize	plasma membrane	50.68	25.51
GSMUA_Achr5P04690_001	Banana	endoplasmic reticulum, golgi, nucleus	47.51	22.73
Zm00001d049804_P001	Maize	plasma membrane	40.72	20.09
Zm00001d021026_P001	Maize	endoplasmic reticulum	41.63	18.89
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	37.1	18.22
Zm00001d028427_P001	Maize	plastid	38.46	17.75
Zm00001d047915_P001	Maize	plastid	38.46	17.75
Zm00001d005598_P001	Maize	plastid	19.46	11.78
Zm00001d029151_P002	Maize	extracellular, golgi	18.1	11.27
Zm00001d020093_P002	Maize	golgi	13.57	9.93
Zm00001d021249_P003	Maize	cytosol	16.29	9.92
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	17.65	9.22
Zm00001d047683_P003	Maize	mitochondrion	14.48	7.55
Zm00001d028825_P001	Maize	golgi, mitochondrion	13.57	7.11
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	14.03	6.14
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	17.19	5.65
Zm00001d028654_P002	Maize	cytosol	17.19	5.65
Zm00001d037784_P002	Maize	endoplasmic reticulum	16.74	5.32
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	8.6	4.18
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	6.33	4.05
Zm00001d017999_P002	Maize	mitochondrion	4.98	3.54
Zm00001d014509_P001	Maize	cytosol	3.17	2.44
Zm00001d017601_P001	Maize	extracellular, peroxisome	0.45	0.33

Protein Annotations

EnsemblPlants:Zm00001d034293_P001	EnsemblPlants:Zm00001d034293_T001	EnsemblPlantsGene:Zm00001d034293	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR43574	PANTHER:PTHR43574:SF17	PFAM:PF16363	ProteinID:ONM09932.1	SEG:seg	SUPFAM:SSF51735
UniParc:UPI00084334D6	UniProt:A0A1D6L6K8	MapMan:3.13.4.1	:	:	:

Description

UDP-glucuronate 4-epimerase 1

Coordinates

chr1:-:288651708..288652510

Molecular Weight (calculated)

23077.7 Da

IEP (calculated)

11.155

GRAVY (calculated)

-0.171

Length

221 amino acids

Sequence
(BLAST)

001: MACLAPELWS TTTSTRFRAA AAASSVLQNP SPRGVPAPCP SCVGEGVAGF VGAHCSLALR KHGDGIVGIV GIDSFNSYYD PSLKKARRAL LGSHGVFVME
101: GDINDGRLLA KLFDVVPFTH VLHLAAQAGL RYAMENPAVY VHSNIVGLVS LLEAARTPTR SRPSSGPPPP STASTTASPS LGSRGGGIAG GRRRGHGAGD
201: PGPPHPPPSL IRHQRRSRRW K

Best Arabidopsis Sequence Match ( AT3G23820.1 )
(BLAST)

001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA

Arabidopsis Description

GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.