Factsheet for Zm00001d021249_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d021249_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12780.1	Zm00001d021249_P003	AT1G12780.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36042	Sorghum	cytosol	94.21	93.96
TraesCS5B01G315700.1	Wheat	cytosol	80.44	79.35
TraesCS5A01G314800.1	Wheat	cytosol	79.61	78.53
TraesCS5D01G321100.1	Wheat	cytosol	79.61	78.32
KRH00406	Soybean	cytosol, mitochondrion, nucleus	14.33	75.36
Os09t0526700-01	Rice	cytosol	76.03	73.99
KRG99450	Soybean	cytosol, mitochondrion, nucleus	14.05	73.91
GSMUA_Achr1P18740_001	Banana	cytosol	71.9	73.73
KRH59827	Soybean	extracellular, golgi	71.07	73.71
KRH41129	Soybean	nucleus	69.97	72.57
Bra016757.1-P	Field mustard	cytosol	69.97	72.36
CDY31278	Canola	cytosol	69.97	72.36
GSMUA_Achr5P13620_001	Banana	cytosol	69.97	72.36
CDY21065	Canola	cytosol	69.7	72.08
VIT_02s0025g04210.t01	Wine grape	cytosol	69.15	71.71
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	68.87	71.23
CDY69000	Canola	cytosol	65.56	71.04
Bra019785.1-P	Field mustard	cytosol	65.56	71.04
Solyc08g080570.2.1	Tomato	cytosol	68.32	70.66
PGSC0003DMT400007898	Potato	cytosol	68.04	70.37
AT1G63180.1	Thale cress	cytosol	68.04	70.37
CDY49193	Canola	cytosol	68.04	70.37
CDY47346	Canola	cytosol	68.04	70.37
KRH51264	Soybean	plastid	68.04	70.37
Bra027626.1-P	Field mustard	cytosol	67.49	69.8
Bra039253.1-P	Field mustard	cytosol	65.84	68.88
HORVU5Hr1G080860.10	Barley	mitochondrion	80.17	68.63
Zm00001d029151_P002	Maize	extracellular, golgi	63.36	64.79
Zm00001d005598_P001	Maize	plastid	59.5	59.18
Zm00001d020093_P002	Maize	golgi	46.01	55.3
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	63.64	54.61
CDY60264	Canola	plastid	69.42	41.24
Zm00001d028825_P001	Maize	golgi, mitochondrion	38.84	33.41
Zm00001d047683_P003	Maize	mitochondrion	38.84	33.25
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	38.84	27.92
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	33.88	27.03
Zm00001d014509_P001	Maize	cytosol	19.28	24.39
Zm00001d045078_P001	Maize	extracellular, golgi	24.79	21.79
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	26.45	21.33
Zm00001d018350_P001	Maize	plasma membrane	25.07	20.73
Zm00001d037087_P001	Maize	endoplasmic reticulum	25.07	20.68
Zm00001d049804_P001	Maize	plasma membrane	24.24	19.64
Zm00001d047915_P001	Maize	plastid	25.07	19.0
Zm00001d028427_P001	Maize	plastid	24.79	18.79
Zm00001d021026_P001	Maize	endoplasmic reticulum	24.79	18.48
Zm00001d017999_P002	Maize	mitochondrion	14.05	16.4
Zm00001d034293_P001	Maize	plastid	9.92	16.29
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	15.15	15.9
Zm00001d037310_P001	Maize	plastid	11.02	13.16
Zm00001d028654_P002	Maize	cytosol	23.42	12.65
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	23.14	12.5
Zm00001d037784_P002	Maize	endoplasmic reticulum	22.86	11.93
Zm00001d038116_P001	Maize	plastid	10.19	11.42
Zm00001d017794_P001	Maize	plastid	11.57	11.26
Zm00001d017601_P001	Maize	extracellular, peroxisome	3.58	4.23

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:100193772	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10
UniProt:B4FU63	EMBL:BT040651	EMBL:BT041449	EMBL:BT054406	EMBL:BT054538	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152
GO:GO:0016853	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM56632.1	PFAM:PF16363	PANTHER:PTHR43725
PANTHER:PTHR43725:SF9	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI00017B7AF2	EnsemblPlantsGene:Zm00001d021249
EnsemblPlants:Zm00001d021249_P003	EnsemblPlants:Zm00001d021249_T003	SEG:seg	:	:	:

Description

Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1

Coordinates

chr7:+:146833092..146835692

Molecular Weight (calculated)

39815.5 Da

IEP (calculated)

7.047

GRAVY (calculated)

-0.263

Length

363 amino acids

Sequence
(BLAST)

001: MAIGGSEAGG GGAGSMRSVL VTGGAGFIGT HTVLRLLEQG YIVTVVDNFH NSVPEALDRV RLIAGPALST RLDFIRGDLR NTDDLEKVFA ARRYDAVIHF
101: AGLKAVGESV AHPEMYYENN LIGTINLYKS MKEHGCKKLV FSSSATVYGW PEVIPCVEDS KLQAANPYGR TKLILEDMAR DYHRADTEWS IVLLRYFNPI
201: GAHSSGEIGE DPKGIPNNLL PYIQQVAVGR LPELNVYGHD YPTRDGTAIR DYIHVVDLAD GHIAALKKLF DSPDIGCVAY NLGTGRGTSV LEMVAAFKKA
301: SGKEIPTKLC PRRPGDATEV YASTEKAERE LAWRAQYGIE EMCRDQWNWA KKNPYGYCGG AKK

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.