Factsheet for Zm00001d002292_P004

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 1
peroxisome 1
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27129	Sorghum	mitochondrion, plastid	75.38	82.65
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	70.33	77.67
TraesCS2A01G460400.1	Wheat	unclear	70.33	77.67
TraesCS2B01G482000.1	Wheat	golgi	70.33	77.67
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	70.11	77.43
Os04t0618200-02	Rice	golgi	66.37	77.24
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	76.7	69.11
GSMUA_Achr8P33320_001	Banana	mitochondrion	62.86	68.59
Zm00001d028825_P001	Maize	golgi, mitochondrion	61.76	66.59
Zm00001d047683_P003	Maize	mitochondrion	60.88	65.33
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	27.91	36.71
Zm00001d017999_P002	Maize	mitochondrion	24.62	36.01
Zm00001d029151_P002	Maize	extracellular, golgi	27.69	35.49
Zm00001d021249_P003	Maize	cytosol	27.03	33.88
Zm00001d005598_P001	Maize	plastid	27.03	33.7
Zm00001d014509_P001	Maize	cytosol	19.56	31.01
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	28.13	30.26
Zm00001d020093_P002	Maize	golgi	19.78	29.8
Zm00001d018350_P001	Maize	plasma membrane	16.92	17.54
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	17.14	17.33
Zm00001d045078_P001	Maize	extracellular, golgi	15.38	16.95
Zm00001d049804_P001	Maize	plasma membrane	16.48	16.74
Zm00001d037087_P001	Maize	endoplasmic reticulum	16.04	16.59
Zm00001d021026_P001	Maize	endoplasmic reticulum	17.14	16.02
Zm00001d028427_P001	Maize	plastid	16.26	15.45
Zm00001d047915_P001	Maize	plastid	16.04	15.24
Zm00001d028654_P002	Maize	cytosol	15.38	10.42
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	15.16	10.27
Zm00001d037784_P002	Maize	endoplasmic reticulum	14.73	9.63
Zm00001d034293_P001	Maize	plastid	4.18	8.6
Zm00001d037310_P001	Maize	plastid	4.62	6.91
Zm00001d017794_P001	Maize	plastid	5.27	6.43
Zm00001d038116_P001	Maize	plastid	4.4	6.17
Zm00001d017601_P001	Maize	extracellular, peroxisome	2.42	3.58

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:100280696	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10
UniProt:A0A1D6DZ98	InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005488
GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	GO:GO:0050662
InterPro:NAD(P)-bd_dom_sf	ProteinID:ONM13852.1	PFAM:PF01370	PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	SUPFAM:SSF51735
SignalP:SignalP-noTM	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI00084505CD	EnsemblPlantsGene:Zm00001d002292	EnsemblPlants:Zm00001d002292_P004
EnsemblPlants:Zm00001d002292_T004	SEG:seg	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr2:-:9672073..9678050

Molecular Weight (calculated)

49007.9 Da

IEP (calculated)

10.121

GRAVY (calculated)

-0.206

Length

455 amino acids

Sequence
(BLAST)

001: MAFLLLAFDT MASIGFGGAR VLGDAVVATG GGEADVRDQE AVAAKEGRGR SRQLFSGVGR RVFRGMAGDS KVGRRGGRVL VGFIPGRRLH MSTTPRSRSQ
101: GSRTTRPWIL SGMDFAGSRR KPNLTGKIAV AAALTVMCII VLKQSPSFSG TSVFSRHETG VTHVLVTGGA GYIGSHATLR LLSDKYRVTI VDNLSRGNIG
201: AVRVLQRYYH NITSNTLTVL EAMAAHNVNT LIYSSTCATY GEPDTMPIVE TTPQNPINPY GKAKKMAEDI ILDFTKSKKQ SNMAVMILRY FNVIGSDPEG
301: RLGEAPRPEL REHGRISGAC FDAALGIIPG LKVRGTDYST ADGTCVRDYI DVTDLVDAHV KALGKAQPGK VGIYNVGTGQ GRSVTEFVEA CKKATGASIK
401: VEYLARRPGD YAEVYSDPSK IHMELNWTAQ YTDLGQSLAQ AWKWQKAHPN GYGPA

Best Arabidopsis Sequence Match ( AT1G30620.1 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.