Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94859 | Sorghum | extracellular, golgi | 96.9 | 96.9 |
| Os05t0595100-01 | Rice | plastid | 88.73 | 88.98 |
| TraesCS1D01G451900.1 | Wheat | endoplasmic reticulum, golgi | 87.89 | 88.14 |
| TraesCS1B01G478400.1 | Wheat | endoplasmic reticulum, golgi | 87.89 | 88.14 |
| TraesCS1A01G443900.1 | Wheat | endoplasmic reticulum, golgi | 87.89 | 88.14 |
| VIT_02s0025g01580.t01 | Wine grape | golgi | 81.41 | 83.05 |
| VIT_02s0025g01560.t01 | Wine grape | golgi | 81.13 | 82.76 |
| Solyc08g082440.2.1 | Tomato | cytosol, golgi | 78.87 | 79.77 |
| PGSC0003DMT400031994 | Potato | golgi | 78.59 | 79.49 |
| KRH60045 | Soybean | extracellular | 77.75 | 78.86 |
| KRH41316 | Soybean | extracellular, golgi | 77.46 | 78.57 |
| KRH27832 | Soybean | plastid | 80.28 | 73.45 |
| KRH77652 | Soybean | plastid | 80.0 | 72.63 |
| Zm00001d005598_P001 | Maize | plastid | 72.11 | 70.14 |
| AT3G28530.1 | Thale cress | cytosol, nucleus | 4.79 | 68.0 |
| HORVU1Hr1G095430.8 | Barley | cytosol, nucleus | 70.14 | 66.05 |
| Zm00001d020093_P002 | Maize | golgi | 56.06 | 65.89 |
| Zm00001d032346_P002 | Maize | endoplasmic reticulum, golgi, plastid | 76.62 | 64.3 |
| Zm00001d021249_P003 | Maize | cytosol | 64.79 | 63.36 |
| Zm00001d047683_P003 | Maize | mitochondrion | 40.0 | 33.49 |
| Zm00001d028825_P001 | Maize | golgi, mitochondrion | 39.72 | 33.41 |
| Zm00001d026311_P001 | Maize | golgi, mitochondrion, plastid | 41.41 | 29.11 |
| Zm00001d002292_P004 | Maize | endoplasmic reticulum, golgi | 35.49 | 27.69 |
| Zm00001d014509_P001 | Maize | cytosol | 19.44 | 24.04 |
| Zm00001d045078_P001 | Maize | extracellular, golgi | 24.79 | 21.31 |
| Zm00001d018350_P001 | Maize | plasma membrane | 25.35 | 20.5 |
| Zm00001d037087_P001 | Maize | endoplasmic reticulum | 24.79 | 20.0 |
| Zm00001d031577_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome, plastid | 25.07 | 19.78 |
| Zm00001d049804_P001 | Maize | plasma membrane | 24.23 | 19.2 |
| Zm00001d028427_P001 | Maize | plastid | 25.63 | 19.0 |
| Zm00001d047915_P001 | Maize | plastid | 25.63 | 19.0 |
| Zm00001d034293_P001 | Maize | plastid | 11.27 | 18.1 |
| Zm00001d021026_P001 | Maize | endoplasmic reticulum | 24.51 | 17.86 |
| Zm00001d010657_P001 | Maize | golgi, plastid, vacuole | 16.62 | 17.05 |
| Zm00001d017999_P002 | Maize | mitochondrion | 14.93 | 17.04 |
| Zm00001d037310_P001 | Maize | plastid | 11.83 | 13.82 |
| Zm00001d028654_P002 | Maize | cytosol | 25.35 | 13.39 |
| Zm00001d047796_P003 | Maize | extracellular, nucleus, plasma membrane | 24.51 | 12.95 |
| Zm00001d037784_P002 | Maize | endoplasmic reticulum | 23.66 | 12.07 |
| Zm00001d038116_P001 | Maize | plastid | 10.99 | 12.04 |
| Zm00001d017794_P001 | Maize | plastid | 12.39 | 11.8 |
| Zm00001d017601_P001 | Maize | extracellular, peroxisome | 3.66 | 4.23 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.8 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | EMBL:BT061986 |
| UniProt:C0HI30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003978 | GO:GO:0005975 | GO:GO:0006012 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016853 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | ProteinID:ONL98072.1 |
| PFAM:PF16363 | PANTHER:PTHR43725 | PANTHER:PTHR43725:SF11 | SUPFAM:SSF51735 | TIGRFAMs:TIGR01179 | InterPro:UDP_G4E |
| UniParc:UPI000194882E | EnsemblPlantsGene:Zm00001d029151 | EnsemblPlants:Zm00001d029151_P002 | EnsemblPlants:Zm00001d029151_T002 | SEG:seg | : |
Description
UDP-glucose 4-epimerase 4
Coordinates
chr1:+:60743343..60747986
Molecular Weight (calculated)
38916.6 Da
IEP (calculated)
7.124
GRAVY (calculated)
-0.098
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSAVLRTIL VTGGAGYIGS HTVLQLLQQG FRVVVVDNLD NASEAALARV AELAGHDGAN LVFHKVDLRD RHALVDIFSS HRFEAVIHFA GLKAVGESVH
101: KPLLYYDNNL VGTITLLEVM AANGCKKLVF SSSATVYGWP KEVPCTEEFP LCATNPYGRT KLVIEDICRD VHRSDPDWKI ILLRYFNPVG AHPSGYIGED
201: PCGVPNNLMP YVQQVAVGRL PHLTVYGTDY STKDGTGVRD YIHVVDLADG HIAALRKLYE DSDKIGCEVY NLGTGKGTSV LEMVAAFEKA SGKKIPLVFA
301: GRRPGDAEIV YAATAKAEKE LKWKAKYGIE EMCRDLWNWA SKNPYGYAGS RDNSK
101: KPLLYYDNNL VGTITLLEVM AANGCKKLVF SSSATVYGWP KEVPCTEEFP LCATNPYGRT KLVIEDICRD VHRSDPDWKI ILLRYFNPVG AHPSGYIGED
201: PCGVPNNLMP YVQQVAVGRL PHLTVYGTDY STKDGTGVRD YIHVVDLADG HIAALRKLYE DSDKIGCEVY NLGTGKGTSV LEMVAAFEKA SGKKIPLVFA
301: GRRPGDAEIV YAATAKAEKE LKWKAKYGIE EMCRDLWNWA SKNPYGYAGS RDNSK
001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS
Arabidopsis Description
UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.