Factsheet for TraesCS1A01G443900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G451900.1	Wheat	endoplasmic reticulum, golgi	98.87	98.87
TraesCS1B01G478400.1	Wheat	endoplasmic reticulum, golgi	98.87	98.87
Os05t0595100-01	Rice	plastid	89.55	89.55
EER94859	Sorghum	extracellular, golgi	88.42	88.17
Zm00001d029151_P002	Maize	extracellular, golgi	88.14	87.89
VIT_02s0025g01580.t01	Wine grape	golgi	79.66	81.03
VIT_02s0025g01560.t01	Wine grape	golgi	79.66	81.03
Solyc08g082440.2.1	Tomato	cytosol, golgi	77.4	78.06
PGSC0003DMT400031994	Potato	golgi	77.12	77.78
KRH60045	Soybean	extracellular	76.55	77.43
KRH41316	Soybean	extracellular, golgi	75.99	76.86
KRH27832	Soybean	plastid	78.81	71.91
KRH77652	Soybean	plastid	78.81	71.36
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	74.58	70.03
TraesCS5A01G183100.1	Wheat	plastid	73.16	69.07
AT3G28530.1	Thale cress	cytosol, nucleus	4.52	64.0
TraesCS5A01G314800.1	Wheat	cytosol	63.56	61.14
TraesCS2A01G460400.1	Wheat	unclear	41.81	35.92
TraesCS5A01G291300.1	Wheat	golgi	41.81	35.15
TraesCS7A01G311100.1	Wheat	golgi	39.27	34.32
TraesCS1A01G315300.1	Wheat	cytosol, mitochondrion, plastid	20.34	19.57
TraesCS6A01G353200.1	Wheat	plastid	24.01	19.41
TraesCS7A01G152300.1	Wheat	endoplasmic reticulum	24.01	19.19
TraesCS4A01G080300.1	Wheat	plastid	25.71	19.04
TraesCS5A01G281600.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	23.73	17.43
TraesCS7A01G256600.1	Wheat	plastid	24.01	17.35
TraesCS4A01G099200.1	Wheat	cytosol	24.01	12.59
TraesCS6A01G257500.1	Wheat	peroxisome	3.39	4.0

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150
GO:GO:0008152	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF11
SUPFAM:SSF51735	TIGRFAMs:TIGR01179	EnsemblPlantsGene:TraesCS1A01G443900	EnsemblPlants:TraesCS1A01G443900.1	InterPro:UDP_G4E	TIGR:cd05247
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:592087339..592091359

Molecular Weight (calculated)

39072.7 Da

IEP (calculated)

7.148

GRAVY (calculated)

-0.198

Length

354 amino acids

Sequence
(BLAST)

001: MVSAVLRTIL VTGGAGYIGS HTVLQLLLQG FRVLVVDSLD NASEEAIRRV RQLANAPQNS LDFRKVDLRD KEALDQIFSS QRFEAVIHFA GLKAVGESVE
101: KPLLYYDNNL IGTITLLQVM AAHGCKKLVF SSSATVYGWP KEVPCTEEFP LSATNPYGRT KLVIEDICRD LQRSDPDWKI ILLRYFNPVG AHPSGYIGED
201: PLGVPNNLMP YVQQVAVGRR PALTVYGTDY NSKDGTGVRD YIHVVDLADG HIAALRKLYE DSDRIGCEVY NLGTGKGTSV LEMVAAFEKA CGKKIPLVYA
301: GRRAGDAETV YAATAKAEKE LKWKAKYGVE EMCRDLWNWA SKNPYGYGST DNGH

Best Arabidopsis Sequence Match ( AT4G23920.1 )
(BLAST)

001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS

Arabidopsis Description

UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.