Factsheet for Os05t0595100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 4
extracellular 3
vacuole 3
plasma membrane 3
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

plastid: 27992503

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G451900.1	Wheat	endoplasmic reticulum, golgi	89.55	89.55
TraesCS1B01G478400.1	Wheat	endoplasmic reticulum, golgi	89.55	89.55
TraesCS1A01G443900.1	Wheat	endoplasmic reticulum, golgi	89.55	89.55
EER94859	Sorghum	extracellular, golgi	88.98	88.73
Zm00001d029151_P002	Maize	extracellular, golgi	88.98	88.73
VIT_02s0025g01580.t01	Wine grape	golgi	81.92	83.33
VIT_02s0025g01560.t01	Wine grape	golgi	81.07	82.47
Solyc08g082440.2.1	Tomato	cytosol, golgi	79.1	79.77
PGSC0003DMT400031994	Potato	golgi	78.81	79.49
KRH60045	Soybean	extracellular	77.97	78.86
KRH41316	Soybean	extracellular, golgi	77.68	78.57
KRH27832	Soybean	plastid	80.79	73.71
KRH77652	Soybean	plastid	81.36	73.66
Os09t0323000-01	Rice	cytosol	75.42	72.36
AT3G28530.1	Thale cress	cytosol, nucleus	5.08	72.0
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	70.62	66.31
Os08t0374800-01	Rice	golgi	75.71	65.69
Os09t0526700-01	Rice	cytosol	60.45	57.37
Os04t0618200-02	Rice	golgi	40.96	37.08
Os07t0139400-01	Rice	plasma membrane	42.66	35.87
Os08t0129700-01	Rice	mitochondrion	40.11	34.98
Os06t0187200-01	Rice	golgi, peroxisome	20.34	23.3
Os02t0791500-01	Rice	endoplasmic reticulum, golgi, plastid	24.58	19.91
Os03t0249500-01	Rice	plastid	25.71	18.8
Os08t0526100-01	Rice	plastid	25.14	18.62
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	25.14	17.87
Os03t0278200-01	Rice	nucleus, plasma membrane	24.86	13.04
Os05t0203400-00	Rice	plastid	10.73	11.38
Os02t0678400-01	Rice	plasma membrane	3.39	3.86
Os03t0249400-01	Rice	nucleus, plasma membrane	0.28	0.79

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:4339812
ProteinID:AAV59383.1	EMBL:AB087745	EMBL:AP014961	ProteinID:BAF18426.1	ProteinID:EEE64916.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005488	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150
GO:GO:0008152	GO:GO:0016853	GO:GO:0050662	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os05g0595100
EnsemblPlants:Os05t0595100-01	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF11	UniProt:Q8LNZ3	SUPFAM:SSF51735
TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI000009DF11	RefSeq:XP_015640233.1	SEG:seg	:

Description

UDP-glucose epimerase 1, UDP-glucose 4-epimerase 1Uridine-diphospho-(UDP)-glucose 4-epimerase, Cell wall carbohydrate partitioning during nitrogen (N) limitation (Os05t0595100-01)

Coordinates

chr5:+:29632006..29635661

Molecular Weight (calculated)

38990.8 Da

IEP (calculated)

7.188

GRAVY (calculated)

-0.134

Length

354 amino acids

Sequence
(BLAST)

001: MVSALLRTIL VTGGAGYIGS HTVLQLLQLG FRVVVLDNLD NASELAILRV RELAGHNANN LDFRKVDLRD KQALDQIFSS QRFEAVIHFA GLKAVGESVQ
101: KPLLYYDNNL IGTITLLQVM AAHGCTKLVF SSSATVYGWP KEVPCTEESP LCAMNPYGRT KLVIEDMCRD LHASDPNWKI ILLRYFNPVG AHPSGYIGED
201: PCGIPNNLMP FVQQVAVGRR PALTVYGTDY NTKDGTGVRD YIHVVDLADG HIAALRKLYE DSDRIGCEVY NLGTGKGTSV LEMVAAFEKA SGKKIPLVFA
301: GRRPGDAEIV YAQTAKAEKE LKWKAKYGVE EMCRDLWNWA SKNPYGYGSP DSSN

Best Arabidopsis Sequence Match ( AT4G23920.1 )
(BLAST)

001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS

Arabidopsis Description

UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.