Factsheet for VIT_02s0025g01580.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01560.t01	Wine grape	golgi	94.83	94.83
Os05t0595100-01	Rice	plastid	83.33	81.92
Solyc08g082440.2.1	Tomato	cytosol, golgi	82.47	81.77
PGSC0003DMT400031994	Potato	golgi	82.47	81.77
Zm00001d029151_P002	Maize	extracellular, golgi	83.05	81.41
EER94859	Sorghum	extracellular, golgi	82.76	81.13
KRH60045	Soybean	extracellular	81.03	80.57
TraesCS1D01G451900.1	Wheat	endoplasmic reticulum, golgi	81.32	79.94
TraesCS1A01G443900.1	Wheat	endoplasmic reticulum, golgi	81.03	79.66
TraesCS1B01G478400.1	Wheat	endoplasmic reticulum, golgi	81.03	79.66
KRH41316	Soybean	extracellular, golgi	79.6	79.14
KRH27832	Soybean	plastid	83.91	75.26
KRH77652	Soybean	plastid	84.2	74.94
VIT_02s0025g04210.t01	Wine grape	cytosol	67.24	66.86
AT3G28530.1	Thale cress	cytosol, nucleus	4.6	64.0
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	66.67	61.54
VIT_10s0003g05640.t01	Wine grape	golgi	42.82	35.65
VIT_03s0017g00980.t01	Wine grape	golgi	41.95	35.01
VIT_16s0022g01450.t01	Wine grape	mitochondrion	26.72	22.79
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	14.66	21.61
VIT_15s0048g00330.t01	Wine grape	plastid	25.29	20.61
VIT_15s0048g00340.t01	Wine grape	endoplasmic reticulum, plastid	25.57	20.55
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	22.7	20.36
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	25.0	20.0
VIT_05s0029g00420.t01	Wine grape	endoplasmic reticulum	24.43	18.85
VIT_15s0048g00320.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, mitochondrion	25.0	18.71
VIT_04s0069g00830.t01	Wine grape	cytosol, mitochondrion, plastid	26.15	13.85
VIT_19s0014g00290.t01	Wine grape	cytosol, mitochondrion, plastid	25.57	13.19
VIT_02s0025g04610.t01	Wine grape	cytosol	4.31	4.97

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:100261533	wikigene:100261533	MapMan:3.13.8	Gene3D:3.40.50.720
Gene3D:3.90.25.10	UniProt:A5BGY1	EMBL:AM459205	ProteinID:CAN63477	ProteinID:CAN63477.1	ProteinID:CBI34495
ProteinID:CBI34495.3	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	EntrezGene:LOC100261533	wikigene:LOC100261533
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF11	SUPFAM:SSF51735
TIGR:TC56340	TIGR:TC61520	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0001520BBB	ArrayExpress:VIT_02s0025g01580
EnsemblPlantsGene:VIT_02s0025g01580	EnsemblPlants:VIT_02s0025g01580.t01	unigene:Vvi.11717	RefSeq:XP_002268294	RefSeq:XP_002268294.2	RefSeq:XP_010659344.1

Description

No Description!

Coordinates

chr2:-:1521946..1527565

Molecular Weight (calculated)

38030.5 Da

IEP (calculated)

6.421

GRAVY (calculated)

-0.081

Length

348 amino acids

Sequence
(BLAST)

001: MAKTILITGG AGYIGSHTVL QLLLGGFRAV VVDNLDNSSE IAIHRVKELA AEFGDNLVFH KLDLRDKQAL EQLFASTNFD AVIHFAGLKA VGESVQKPLL
101: YYDNNLIGTI TLLEVMAAHG CKKLVFSSSA TVYGWPKEVP CTEEFPLCAA NPYGRTKLVI EDICRDIYGS DSEWKIVLLR YFNPVGAHSS GHIGEDPRGI
201: PNNLMPFVQQ VAVGRRPALT VFGSDYSTKD GTGVRDYIHV VDLADGHIAA LCKLFNSEIG CEVYNLGTGK GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEIVYASTAK AEKELNWKAK YGISEMCRDQ WNWASKNPYG YESSPTQD

Best Arabidopsis Sequence Match ( AT4G10960.1 )
(BLAST)

001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H

Arabidopsis Description

UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.