CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 3
golgi 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029151_P002	Maize	extracellular, golgi	96.9	96.9
Os05t0595100-01	Rice	plastid	88.73	88.98
TraesCS1B01G478400.1	Wheat	endoplasmic reticulum, golgi	88.45	88.7
TraesCS1D01G451900.1	Wheat	endoplasmic reticulum, golgi	88.17	88.42
TraesCS1A01G443900.1	Wheat	endoplasmic reticulum, golgi	88.17	88.42
VIT_02s0025g01580.t01	Wine grape	golgi	81.13	82.76
VIT_02s0025g01560.t01	Wine grape	golgi	80.85	82.47
Solyc08g082440.2.1	Tomato	cytosol, golgi	79.15	80.06
PGSC0003DMT400031994	Potato	golgi	78.87	79.77
KRH60045	Soybean	extracellular	77.46	78.57
KRH41316	Soybean	extracellular, golgi	77.18	78.29
KRH27832	Soybean	plastid	80.85	73.97
KRH77652	Soybean	plastid	80.28	72.89
EER98731	Sorghum	plastid	72.39	70.22
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	70.14	66.05
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	76.34	64.07
KXG36042	Sorghum	cytosol	65.63	64.01
AT3G28530.1	Thale cress	cytosol, nucleus	4.51	64.0
EER95001	Sorghum	mitochondrion	41.13	35.87
KXG27129	Sorghum	mitochondrion, plastid	41.41	35.42
EER95854	Sorghum	mitochondrion, plastid	41.69	34.42
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	25.35	20.5
OQU75981	Sorghum	endoplasmic reticulum	25.35	20.45
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	25.63	19.0
EER95171	Sorghum	plastid	25.35	18.75
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	24.79	17.81
EER95086	Sorghum	cytosol, mitochondrion, plastid	25.35	13.39
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	25.07	13.24
KXG21627	Sorghum	mitochondrion	23.66	12.24
EES07456	Sorghum	cytosol, peroxisome, plastid	3.38	3.91

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8082653
UniProt:C5WZT3	EnsemblPlants:EER94859	ProteinID:EER94859	ProteinID:EER94859.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF11	MetaCyc:PWY-3821
MetaCyc:PWY-6317	MetaCyc:PWY-6397	MetaCyc:PWY-6527	MetaCyc:PWY-7328	MetaCyc:PWY-7344	EnsemblPlantsGene:SORBI_3001G372500
SUPFAM:SSF51735	unigene:Sbi.604	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0001A8344E	RefSeq:XP_002467861.1

Description

hypothetical protein

Coordinates

chr1:-:66052711..66057789

Molecular Weight (calculated)

39012.8 Da

IEP (calculated)

6.943

GRAVY (calculated)

-0.103

Length

355 amino acids

Sequence
(BLAST)

001: MVSAVLRTIL VTGGAGYIGS HTVLQLLQQG FRVVVVDNLD NASEVALVRV AELAGHNGAN LVFHKVDLRD RHALEEIFSS HRFEAVIHFA GLKAVGESVH
101: KPLLYYDNNL IGTITLLEVM AANGCKKLVF SSSATVYGWP KEVPCTEEFP LCATNPYGRT KLVIEDICRD VHRSDPDWKI ILLRYFNPVG AHPSGYIGED
201: PCGVPNNLMP YVQQVAVGRL PHLTVYGTDY NTKDGTGVRD YIHVVDLADG HIAALRKLYE DSDKIGCEVY NLGTGKGTSV LEMVAAFEKV SGKKIPLVFA
301: GRRPGDAEIV YAATAKAEKD LKWKAKYGIE EMCRDLWNWA SKNPYGYAGS QDNGK

Best Arabidopsis Sequence Match ( AT4G23920.1 )
(BLAST)

001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS

Arabidopsis Description

UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.