CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
KXG36042

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12780.1	KXG36042	AT1G12780.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021249_P003	Maize	cytosol	93.96	94.21
TraesCS5B01G315700.1	Wheat	cytosol	80.49	79.62
TraesCS5A01G314800.1	Wheat	cytosol	79.67	78.8
TraesCS5D01G321100.1	Wheat	cytosol	79.4	78.32
KRH00406	Soybean	cytosol, mitochondrion, nucleus	14.29	75.36
Os09t0526700-01	Rice	cytosol	76.37	74.53
KRH59827	Soybean	extracellular, golgi	71.43	74.29
GSMUA_Achr1P18740_001	Banana	cytosol	71.98	74.01
KRG99450	Soybean	cytosol, mitochondrion, nucleus	14.01	73.91
CDY31278	Canola	cytosol	70.88	73.5
Bra016757.1-P	Field mustard	cytosol	70.88	73.5
CDY21065	Canola	cytosol	70.6	73.22
KRH41129	Soybean	nucleus	70.33	73.14
GSMUA_Achr5P13620_001	Banana	cytosol	70.33	72.93
CDY69000	Canola	cytosol	66.76	72.54
Bra019785.1-P	Field mustard	cytosol	66.76	72.54
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	69.78	72.36
VIT_02s0025g04210.t01	Wine grape	cytosol	69.23	72.0
AT1G63180.1	Thale cress	cytosol	68.96	71.51
CDY47346	Canola	cytosol	68.96	71.51
CDY49193	Canola	cytosol	68.96	71.51
Bra027626.1-P	Field mustard	cytosol	68.41	70.94
Solyc08g080570.2.1	Tomato	cytosol	67.86	70.37
PGSC0003DMT400007898	Potato	cytosol	67.58	70.09
KRH51264	Soybean	plastid	67.58	70.09
Bra039253.1-P	Field mustard	cytosol	66.48	69.74
HORVU5Hr1G080860.10	Barley	mitochondrion	80.22	68.87
EER94859	Sorghum	extracellular, golgi	64.01	65.63
EER98731	Sorghum	plastid	58.79	58.47
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	63.46	54.61
CDY60264	Canola	plastid	69.78	41.57
EER95001	Sorghum	mitochondrion	41.21	36.85
KXG27129	Sorghum	mitochondrion, plastid	40.38	35.42
EER95854	Sorghum	mitochondrion, plastid	39.56	33.49
OQU75981	Sorghum	endoplasmic reticulum	26.37	21.82
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	25.27	20.96
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	25.82	19.62
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	26.37	19.43
EER95171	Sorghum	plastid	25.55	19.38
EER95086	Sorghum	cytosol, mitochondrion, plastid	22.8	12.35
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	22.53	12.2
KXG21627	Sorghum	mitochondrion	22.25	11.81
EES07456	Sorghum	cytosol, peroxisome, plastid	3.3	3.91

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	UniProt:A0A1B6QDQ0
GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150
GO:GO:0008152	GO:GO:0016853	EnsemblPlants:KXG36042	ProteinID:KXG36042	ProteinID:KXG36042.1	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF9	MetaCyc:PWY-3821	MetaCyc:PWY-6317
MetaCyc:PWY-6397	MetaCyc:PWY-6527	MetaCyc:PWY-7328	MetaCyc:PWY-7344	EnsemblPlantsGene:SORBI_3002G271200	SUPFAM:SSF51735
TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0003C71C89	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr2:-:65474919..65477505

Molecular Weight (calculated)

39738.2 Da

IEP (calculated)

6.848

GRAVY (calculated)

-0.281

Length

364 amino acids

Sequence
(BLAST)

001: MAIGGSDAGG GGAAAGRRSV LVTGGAGFIG THTVLRLLEQ GYGVTVVDNF HNSVPEALDR VRLIAGPALS ARLDFIRGDL RSTEDLEKVF SARRYDAVIH
101: FAGLKAVGES VAHPEMYYEN NLVGTINLYK TMKAHNCKKL VFSSSATVYG WPEEIPCVED SKLQAANPYG RTKLILEDMA RDYHRADPEW SIVLLRYFNP
201: IGAHSSGEIG EDPKGIPNNL LPYIQQVAVG RLPELNVYGH DYPTRDGTAI RDYIHVVDLA DGHIAALNKL FDAPDIGCVA YNLGTGRGTS VLEMVAAFKK
301: ASGKEIPTKL CPRRPGDATE VYASTEKAGR ELGWRAQYGI EEMCRDQWNW AKKNPYGYCG SAEK

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.