Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
- peroxisome 2
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69000 | Canola | cytosol | 86.61 | 90.75 |
| AT1G63180.1 | Thale cress | cytosol | 90.6 | 90.6 |
| Bra019785.1-P | Field mustard | cytosol | 86.32 | 90.45 |
| KRH59827 | Soybean | extracellular, golgi | 85.47 | 85.71 |
| VIT_02s0025g04210.t01 | Wine grape | cytosol | 85.47 | 85.71 |
| KRH41129 | Soybean | nucleus | 84.62 | 84.86 |
| Solyc08g080570.2.1 | Tomato | cytosol | 80.34 | 80.34 |
| PGSC0003DMT400007898 | Potato | cytosol | 80.34 | 80.34 |
| GSMUA_Achr1P18740_001 | Banana | cytosol | 80.34 | 79.66 |
| GSMUA_Achr5P13620_001 | Banana | cytosol | 76.92 | 76.92 |
| KXG36042 | Sorghum | cytosol | 72.36 | 69.78 |
| Zm00001d021249_P003 | Maize | cytosol | 71.23 | 68.87 |
| TraesCS5B01G315700.1 | Wheat | cytosol | 71.51 | 68.21 |
| TraesCS5A01G314800.1 | Wheat | cytosol | 71.23 | 67.93 |
| TraesCS5D01G321100.1 | Wheat | cytosol | 70.94 | 67.48 |
| AT4G10960.1 | Thale cress | golgi | 65.24 | 65.24 |
| AT4G23920.1 | Thale cress | cytosol | 64.67 | 64.86 |
| Os09t0526700-01 | Rice | cytosol | 68.38 | 64.34 |
| AT1G64440.1 | Thale cress | cytosol, golgi | 63.53 | 64.08 |
| HORVU5Hr1G080860.10 | Barley | mitochondrion | 70.94 | 58.73 |
| AT3G28530.1 | Thale cress | cytosol, nucleus | 3.42 | 48.0 |
| AT2G34850.2 | Thale cress | cytosol | 25.07 | 37.29 |
| AT4G20460.1 | Thale cress | golgi, mitochondrion | 38.18 | 32.6 |
| AT1G30620.4 | Thale cress | golgi, mitochondrion | 38.75 | 32.46 |
| AT5G44480.1 | Thale cress | mitochondrion | 38.75 | 31.19 |
| AT4G12250.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 27.07 | 21.79 |
| AT2G45310.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 26.78 | 21.51 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 26.21 | 21.45 |
| AT4G00110.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 26.21 | 21.4 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 27.07 | 20.65 |
| AT1G02000.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 25.36 | 20.51 |
| AT1G78570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 24.22 | 12.71 |
| AT3G14790.2 | Thale cress | mitochondrion | 23.65 | 12.44 |
| AT1G53500.1 | Thale cress | cytosol, extracellular, peroxisome | 23.65 | 12.44 |
| AT1G63000.1 | Thale cress | cytosol | 4.27 | 4.98 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.8 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | EntrezGene:837834 |
| UniProt:A0A178WNS4 | ProteinID:AAF78483.1 | ProteinID:AEE28928.1 | EMBL:AF334724 | EMBL:AK317768 | ArrayExpress:AT1G12780 |
| EnsemblPlantsGene:AT1G12780 | RefSeq:AT1G12780 | TAIR:AT1G12780 | RefSeq:AT1G12780-TAIR-G | EnsemblPlants:AT1G12780.1 | TAIR:AT1G12780.1 |
| EMBL:AY054207 | EMBL:AY120709 | EMBL:BT000032 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003978 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 |
| GO:GO:0005975 | GO:GO:0006012 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016853 | GO:GO:0016857 | GO:GO:0033358 |
| GO:GO:0045227 | GO:GO:0050373 | GO:GO:0071555 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_172738.1 |
| InterPro:Nuc_sugar_epim | ProteinID:OAP19884.1 | PFAM:PF16363 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000025 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006020 |
| PO:PO:0006036 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020003 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020123 | PO:PO:0020131 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025181 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR01713 | PANTHER:PTHR43725 |
| PANTHER:PTHR43725:SF9 | UniProt:Q42605 | SUPFAM:SSF51735 | TIGRFAMs:TIGR01179 | InterPro:UDP_G4E | Symbol:UGE1 |
| UniParc:UPI0000000E1C | EMBL:Z54214 | : | : | : | : |
Description
UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
Coordinates
chr1:-:4355926..4358894
Molecular Weight (calculated)
39159.9 Da
IEP (calculated)
6.523
GRAVY (calculated)
-0.344
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.