Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29113 | Canola | golgi | 88.99 | 94.17 |
| Bra027557.1-P | Field mustard | golgi | 88.76 | 93.93 |
| CDY13102 | Canola | golgi | 88.53 | 93.69 |
| Bra033746.1-P | Field mustard | golgi | 87.39 | 92.48 |
| CDY49015 | Canola | golgi | 87.16 | 92.23 |
| CDY49498 | Canola | golgi | 86.47 | 91.5 |
| AT4G20460.1 | Thale cress | golgi, mitochondrion | 79.36 | 84.18 |
| AT2G34850.2 | Thale cress | cytosol | 44.95 | 83.05 |
| Os04t0618200-02 | Rice | golgi | 70.41 | 78.52 |
| PGSC0003DMT400080637 | Potato | golgi | 72.02 | 78.5 |
| Solyc02g030230.2.1 | Tomato | mitochondrion | 74.31 | 77.88 |
| KRH59194 | Soybean | golgi, mitochondrion | 74.08 | 77.64 |
| KRH11871 | Soybean | golgi, plastid | 73.85 | 77.59 |
| KRH36892 | Soybean | golgi, mitochondrion | 73.85 | 77.59 |
| KRH43065 | Soybean | golgi, mitochondrion, plastid | 73.85 | 77.4 |
| AT1G30620.4 | Thale cress | golgi, mitochondrion | 74.31 | 77.33 |
| Solyc02g069580.2.1 | Tomato | golgi, mitochondrion | 73.62 | 76.98 |
| GSMUA_Achr11P... | Banana | mitochondrion | 73.17 | 76.5 |
| PGSC0003DMT400054459 | Potato | mitochondrion | 73.17 | 76.5 |
| GSMUA_Achr3P23390_001 | Banana | mitochondrion | 72.94 | 76.26 |
| GSMUA_Achr11P... | Banana | cytosol, golgi | 67.66 | 75.45 |
| EER95001 | Sorghum | mitochondrion | 70.41 | 75.43 |
| GSMUA_Achr8P33320_001 | Banana | mitochondrion | 71.79 | 75.06 |
| Os08t0129700-01 | Rice | mitochondrion | 69.72 | 74.88 |
| KXG27129 | Sorghum | mitochondrion, plastid | 71.1 | 74.7 |
| HORVU7Hr1G074300.2 | Barley | golgi | 69.04 | 74.32 |
| TraesCS2A01G460400.1 | Wheat | unclear | 70.18 | 74.27 |
| TraesCS7D01G307500.1 | Wheat | golgi, mitochondrion | 68.81 | 74.07 |
| TraesCS2B01G482000.1 | Wheat | golgi | 69.95 | 74.03 |
| HORVU2Hr1G104110.1 | Barley | mitochondrion, plastid | 69.95 | 74.03 |
| TraesCS2D01G460600.1 | Wheat | mitochondrion, plastid | 69.72 | 73.79 |
| TraesCS7A01G311100.1 | Wheat | golgi | 68.35 | 73.58 |
| Os07t0139400-01 | Rice | plasma membrane | 70.64 | 73.16 |
| HORVU5Hr1G077110.3 | Barley | mitochondrion | 70.18 | 72.68 |
| TraesCS5D01G298700.1 | Wheat | mitochondrion | 70.18 | 72.68 |
| TraesCS5A01G291300.1 | Wheat | golgi | 70.18 | 72.68 |
| TraesCS7B01G210700.2 | Wheat | golgi | 68.81 | 72.64 |
| GSMUA_Achr4P31860_001 | Banana | mitochondrion | 69.27 | 72.6 |
| TraesCS5B01G290300.1 | Wheat | mitochondrion | 69.95 | 72.45 |
| EER95854 | Sorghum | mitochondrion, plastid | 71.1 | 72.09 |
| AT4G23920.1 | Thale cress | cytosol | 33.49 | 41.71 |
| AT1G64440.1 | Thale cress | cytosol, golgi | 33.26 | 41.67 |
| AT4G10960.1 | Thale cress | golgi | 33.49 | 41.6 |
| AT1G12780.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 31.19 | 38.75 |
| AT1G63180.1 | Thale cress | cytosol | 30.96 | 38.46 |
| Zm00001d017999_P002 | Maize | mitochondrion | 27.06 | 37.94 |
| Zm00001d010657_P001 | Maize | golgi, plastid, vacuole | 29.82 | 37.57 |
| AT3G28530.1 | Thale cress | cytosol, nucleus | 1.38 | 24.0 |
| AT4G12250.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 22.02 | 22.02 |
| AT1G02000.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 20.41 | 20.51 |
| AT4G00110.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 19.95 | 20.23 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 19.72 | 20.05 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 20.64 | 19.57 |
| AT2G45310.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 19.5 | 19.45 |
| AT1G53500.1 | Thale cress | cytosol, extracellular, peroxisome | 19.95 | 13.04 |
| AT1G78570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 19.72 | 12.86 |
| AT3G14790.2 | Thale cress | mitochondrion | 19.5 | 12.74 |
| AT1G63000.1 | Thale cress | cytosol | 2.29 | 3.32 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.7.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | EntrezGene:834475 |
| ProteinID:AED95113.1 | ArrayExpress:AT5G44480 | EnsemblPlantsGene:AT5G44480 | RefSeq:AT5G44480 | TAIR:AT5G44480 | RefSeq:AT5G44480-TAIR-G |
| EnsemblPlants:AT5G44480.1 | TAIR:AT5G44480.1 | Unigene:At.55356 | ProteinID:BAB09155.1 | Symbol:DUR | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003978 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005794 | GO:GO:0005975 | GO:GO:0006012 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016853 |
| GO:GO:0032580 | GO:GO:0033358 | GO:GO:0045227 | GO:GO:0050373 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf |
| RefSeq:NP_199261.1 | PFAM:PF16363 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43349 | PANTHER:PTHR43349:SF14 | UniProt:Q9FI17 | SUPFAM:SSF51735 |
| TIGRFAMs:TIGR01179 | TMHMM:TMhelix | InterPro:UDP_G4E | UniParc:UPI000009D49F | SEG:seg | : |
Description
DURPutative UDP-arabinose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI17]
Coordinates
chr5:+:17921515..17923643
Molecular Weight (calculated)
48348.2 Da
IEP (calculated)
9.336
GRAVY (calculated)
-0.263
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNSSGVRTQ RRSPRPLSLG GRKIITPTKF AYDHHNPDKV LDFVEMDCLE PKTKNNLTGK LLLVASLLIL AIIVISQSSS FTSPSAFSQR EEGVTHVLVT
101: GGAGYIGSHA ALRLLRDSYR VTIVDNLSRG NLGAVKTLQQ LFPQTGRLQF IYADLGDPLA VEKIFSENAF DAVMHFAAVA YVGESTLYPL KYYHNITSNT
201: LGVLEAMARH KVKKLIYSST CATYGEPEKM PITEDTPQVP INPYGKAKKM AEDMILDFSK NSDMAVMILR YFNVIGSDPG GRLGEAPRPE LREQGRISGA
301: CFDAARGFIP GLQVKGTDYK TSDGTCIRDY IDVTDLVDAH VKALEKAQPR KVGIYNVGTG KGRSVKEFVE ACKKATGVEI KVDFLPRRPG DYAEVYSDPT
401: KILKDLNWTA RFTNLQDSLQ VAWRWQKIHP HGYNSY
101: GGAGYIGSHA ALRLLRDSYR VTIVDNLSRG NLGAVKTLQQ LFPQTGRLQF IYADLGDPLA VEKIFSENAF DAVMHFAAVA YVGESTLYPL KYYHNITSNT
201: LGVLEAMARH KVKKLIYSST CATYGEPEKM PITEDTPQVP INPYGKAKKM AEDMILDFSK NSDMAVMILR YFNVIGSDPG GRLGEAPRPE LREQGRISGA
301: CFDAARGFIP GLQVKGTDYK TSDGTCIRDY IDVTDLVDAH VKALEKAQPR KVGIYNVGTG KGRSVKEFVE ACKKATGVEI KVDFLPRRPG DYAEVYSDPT
401: KILKDLNWTA RFTNLQDSLQ VAWRWQKIHP HGYNSY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.