Factsheet for GSMUA_Achr11P25700_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 5
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P23390_001	Banana	mitochondrion	92.57	92.57
GSMUA_Achr11P...	Banana	cytosol, golgi	80.82	86.19
GSMUA_Achr8P33320_001	Banana	mitochondrion	85.85	85.85
AT2G34850.2	Thale cress	cytosol	47.72	84.32
Os08t0129700-01	Rice	mitochondrion	81.3	83.5
Solyc07g043550.2.1	Tomato	cytosol, unclear	60.43	83.44
EER95001	Sorghum	mitochondrion	81.06	83.05
CDY71965	Canola	cytosol, mitochondrion	47.0	82.35
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	79.62	81.98
HORVU7Hr1G074300.2	Barley	golgi	79.38	81.73
TraesCS7A01G311100.1	Wheat	golgi	79.14	81.48
GSMUA_Achr4P31860_001	Banana	mitochondrion	80.58	80.77
TraesCS7B01G210700.2	Wheat	golgi	79.62	80.39
PGSC0003DMT400080637	Potato	golgi	76.98	80.25
Solyc02g030230.2.1	Tomato	mitochondrion	79.62	79.81
KRH36892	Soybean	golgi, mitochondrion	78.66	79.04
PGSC0003DMT400041159	Potato	golgi, mitochondrion	73.38	78.87
CDY09555	Canola	mitochondrion	79.38	78.81
KRH11871	Soybean	golgi, plastid	78.42	78.8
Bra032409.1-P	Field mustard	mitochondrion	79.14	78.76
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	78.66	78.66
CDY02312	Canola	mitochondrion	79.14	78.57
CDY52524	Canola	golgi	79.62	78.3
PGSC0003DMT400054459	Potato	mitochondrion	78.18	78.18
AT1G30620.4	Thale cress	golgi, mitochondrion	78.42	78.04
CDX82768	Canola	mitochondrion	76.74	77.86
CDX78998	Canola	mitochondrion	76.74	77.86
AT4G20460.1	Thale cress	golgi, mitochondrion	76.74	77.86
CDY31644	Canola	golgi	78.66	77.36
Solyc12g006410.1.1	Tomato	unclear	73.86	77.19
KRH59194	Soybean	golgi, mitochondrion	76.98	77.16
CDY29113	Canola	golgi	76.02	76.94
CDY13102	Canola	golgi	75.78	76.7
Bra027557.1-P	Field mustard	golgi	75.78	76.7
KRH43065	Soybean	golgi, mitochondrion, plastid	76.5	76.68
Bra020917.1-P	Field mustard	golgi, mitochondrion	75.06	76.16
Zm00001d047683_P003	Maize	mitochondrion	77.22	75.94
Bra033746.1-P	Field mustard	golgi	74.82	75.73
Zm00001d028825_P001	Maize	golgi, mitochondrion	76.5	75.59
CDY49015	Canola	golgi	74.58	75.49
CDY49498	Canola	golgi	74.34	75.24
AT5G44480.1	Thale cress	mitochondrion	76.5	73.17
Bra005387.1-P	Field mustard	golgi, mitochondrion	79.38	72.91
Bra013466.1-P	Field mustard	mitochondrion	75.3	67.82
GSMUA_Achr4P02670_001	Banana	golgi	36.93	44.13
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	36.69	43.84
GSMUA_Achr5P09200_001	Banana	golgi	36.45	42.82
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	35.01	41.83
GSMUA_Achr1P18740_001	Banana	cytosol	32.61	38.42
GSMUA_Achr5P13620_001	Banana	cytosol	31.65	37.61
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	36.21	34.87
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	34.77	34.2
Zm00001d014509_P001	Maize	cytosol	23.26	33.8
GSMUA_Achr9P06140_001	Banana	plastid	36.45	29.17
GSMUA_Achr6P26620_001	Banana	plastid	36.93	28.68
GSMUA_Achr10P...	Banana	cytosol, endoplasmic reticulum, golgi	22.06	22.72
GSMUA_Achr4P02040_001	Banana	endoplasmic reticulum	20.86	21.53
GSMUA_Achr3P04850_001	Banana	endoplasmic reticulum	21.1	21.26
GSMUA_Achr9P13500_001	Banana	cytosol, endoplasmic reticulum, golgi, plastid	21.1	21.2
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	21.82	19.83
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	20.38	19.77
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	20.38	19.19
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	20.38	19.14
GSMUA_Achr5P25290_001	Banana	mitochondrion	5.28	18.97
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	20.14	18.96
GSMUA_Achr7P16250_001	Banana	cytosol, endoplasmic reticulum, golgi	22.3	18.2
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, nucleus	16.79	18.18
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	20.38	17.53
GSMUA_Achr4P10430_001	Banana	cytosol, extracellular, mitochondrion	21.58	13.87
GSMUA_Achr3P31810_001	Banana	cytosol, mitochondrion, peroxisome	18.47	12.4
GSMUA_Achr5P04690_001	Banana	endoplasmic reticulum, golgi, nucleus	13.67	12.34
GSMUA_Achr3P31820_001	Banana	cytosol, mitochondrion, plastid	17.51	12.07
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	17.75	11.64
GSMUA_Achr4P02550_001	Banana	mitochondrion	6.0	5.48
GSMUA_Achr4P29070_001	Banana	cytosol	0.72	4.55
GSMUA_Achr5P10430_001	Banana	cytosol	3.12	4.25
GSMUA_Achr4P29060_001	Banana	cytosol	2.16	4.11
GSMUA_Achr1P03840_001	Banana	cytosol	2.64	3.59

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005575	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	EnsemblPlantsGene:GSMUA_Achr11G25700_001	EnsemblPlants:GSMUA_Achr11P25700_001
EnsemblPlants:GSMUA_Achr11T25700_001	UniProt:M0RVF0	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349
PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E	UniParc:UPI000296EF2A

Description

Probable UDP-arabinose 4-epimerase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G25700_001]

Coordinates

chr11:+:24751089..24756689

Molecular Weight (calculated)

45991.2 Da

IEP (calculated)

8.976

GRAVY (calculated)

-0.228

Length

417 amino acids

Sequence
(BLAST)

001: MLPTNRSRTQ PRAVRPWPLS GMDNSDSRRK PHVYGKLLMA VILTAFCILI LKQSPNFSGS NVFSHHEPGV THVLVTGGAG YIGSHAALRL LTDSYRVTIV
101: DNLSRGNLGA IRVLQQLFPE PGRLQFIFAD LGDARAVNRI FAENAFDAVM HFAAVAYVGE STLEPLRYYH NITANTLVIL EAMAAHGVKT LIYSSTCATY
201: GEPEKMPITE ETPQLPINPY GKAKKMAEDI ILDFSKRSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ALGIIPGLKV KGTDYATSDG
301: TCIRDYIDVT DLVDAHVKAL DKARPNKVGI YNVGTGKGRS VKEFVEACKK ATGVNIKVDY LERRPGDYAE VYSDPSKINS ELNWTAHYTD LQKSLSTAWR
401: WQKSHPNGYR SPSAMAV

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.