CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4
golgi 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11871	Soybean	golgi, plastid	97.59	97.59
KRH59194	Soybean	golgi, mitochondrion	86.99	86.78
KRH43065	Soybean	golgi, mitochondrion, plastid	86.75	86.54
Solyc07g043550.2.1	Tomato	cytosol, unclear	60.48	83.11
AT2G34850.2	Thale cress	cytosol	46.75	82.2
CDY71965	Canola	cytosol, mitochondrion	46.99	81.93
Os04t0618200-02	Rice	golgi	77.11	81.84
PGSC0003DMT400080637	Potato	golgi	78.8	81.75
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	81.93	81.53
Bra032409.1-P	Field mustard	mitochondrion	81.93	81.15
Solyc02g030230.2.1	Tomato	mitochondrion	81.2	81.01
CDY02312	Canola	mitochondrion	81.93	80.95
CDY09555	Canola	mitochondrion	81.93	80.95
PGSC0003DMT400054459	Potato	mitochondrion	81.2	80.82
CDX82768	Canola	mitochondrion	79.28	80.05
CDX78998	Canola	mitochondrion	79.28	80.05
AT1G30620.4	Thale cress	golgi, mitochondrion	80.72	79.95
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	79.04	79.61
AT4G20460.1	Thale cress	golgi, mitochondrion	78.8	79.56
Os08t0129700-01	Rice	mitochondrion	77.83	79.56
GSMUA_Achr11P...	Banana	cytosol, golgi	74.94	79.54
KXG27129	Sorghum	mitochondrion, plastid	79.28	79.28
TraesCS2A01G460400.1	Wheat	unclear	78.55	79.13
TraesCS2B01G482000.1	Wheat	golgi	78.55	79.13
HORVU7Hr1G074300.2	Barley	golgi	77.11	79.01
TraesCS7A01G311100.1	Wheat	golgi	77.11	79.01
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	77.11	79.01
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	78.31	78.88
GSMUA_Achr11P...	Banana	mitochondrion	79.04	78.66
GSMUA_Achr3P23390_001	Banana	mitochondrion	78.8	78.42
EER95001	Sorghum	mitochondrion	76.87	78.38
VIT_03s0017g00980.t01	Wine grape	golgi	78.55	78.18
CDY29113	Canola	golgi	77.59	78.16
Bra027557.1-P	Field mustard	golgi	77.59	78.16
CDY13102	Canola	golgi	77.35	77.91
GSMUA_Achr8P33320_001	Banana	mitochondrion	78.07	77.7
Bra020917.1-P	Field mustard	golgi, mitochondrion	76.87	77.62
PGSC0003DMT400041159	Potato	golgi, mitochondrion	72.53	77.58
TraesCS7B01G210700.2	Wheat	golgi	77.11	77.48
Bra033746.1-P	Field mustard	golgi	76.87	77.43
CDY52524	Canola	golgi	79.04	77.36
CDY49015	Canola	golgi	76.63	77.18
GSMUA_Achr4P31860_001	Banana	mitochondrion	77.35	77.16
CDY31644	Canola	golgi	78.8	77.12
CDY49498	Canola	golgi	76.14	76.7
Os07t0139400-01	Rice	plasma membrane	77.59	76.48
Solyc12g006410.1.1	Tomato	unclear	72.77	75.69
HORVU5Hr1G077110.3	Barley	mitochondrion	76.63	75.53
EER95854	Sorghum	mitochondrion, plastid	78.07	75.35
TraesCS5A01G291300.1	Wheat	golgi	76.14	75.06
TraesCS5D01G298700.1	Wheat	mitochondrion	76.14	75.06
TraesCS5B01G290300.1	Wheat	mitochondrion	75.9	74.82
AT5G44480.1	Thale cress	mitochondrion	77.59	73.85
Bra005387.1-P	Field mustard	golgi, mitochondrion	78.8	72.03
Bra013466.1-P	Field mustard	mitochondrion	77.59	69.55
KRH60045	Soybean	extracellular	35.66	42.29
KRH41316	Soybean	extracellular, golgi	34.94	41.43
KRH51264	Soybean	plastid	34.46	40.74
KRH59827	Soybean	extracellular, golgi	33.73	40.0
KRH41129	Soybean	nucleus	32.29	38.29
KRH26241	Soybean	cytosol	4.82	37.74
KRH00406	Soybean	cytosol, mitochondrion, nucleus	6.27	37.68
KRG99450	Soybean	cytosol, mitochondrion, nucleus	6.27	37.68
Zm00001d017999_P002	Maize	mitochondrion	27.95	37.3
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	31.08	37.28
KRH77652	Soybean	plastid	34.7	36.83
KRH27832	Soybean	plastid	33.73	36.08
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	23.13	22.38
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	23.13	22.27
KRH40009	Soybean	plastid	21.69	22.11
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	22.89	22.09
KRH02967	Soybean	nucleus	22.89	22.04
KRH58854	Soybean	endoplasmic reticulum, golgi	21.2	21.15
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	21.69	20.55
KRH76209	Soybean	endoplasmic reticulum, plastid	21.69	20.55
KRG97348	Soybean	endoplasmic reticulum	20.96	19.82
KRH31569	Soybean	mitochondrion	21.69	19.48
KRH42756	Soybean	extracellular, golgi, plastid	21.69	18.26
KRH46062	Soybean	cytosol	19.76	13.4
KRH04933	Soybean	cytosol, mitochondrion, plastid	20.72	13.35
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	20.72	13.03
KRH43408	Soybean	nucleus	20.96	13.02
KRH13001	Soybean	cytosol, mitochondrion, plastid	20.96	13.02
KRH16155	Soybean	cytosol	20.48	12.98
KRH27429	Soybean	cytosol, mitochondrion, plastid	20.72	12.86
KRH21867	Soybean	cytosol, mitochondrion, plastid	20.72	12.86
KRH57264	Soybean	endoplasmic reticulum	3.37	6.7
KRH77471	Soybean	cytosol, endoplasmic reticulum	3.61	5.4
KRH03995	Soybean	plastid	3.61	4.97
KRH57441	Soybean	cytosol	2.41	3.22

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:100783060	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10
EMBL:ACUP02005400	EnsemblPlantsGene:GLYMA_09G030300	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575
GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016853	UniProt:I1L0L0	EnsemblPlants:KRH36892	ProteinID:KRH36892	ProteinID:KRH36892.1	ProteinID:KRH36893.1
ProteinID:KRH36894.1	ProteinID:KRH36895.1	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349
PANTHER:PTHR43349:SF14	MetaCyc:PWY-3821	MetaCyc:PWY-6317	MetaCyc:PWY-6397	MetaCyc:PWY-6527	MetaCyc:PWY-7328
MetaCyc:PWY-7344	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E	UniParc:UPI000233814E

Description

hypothetical protein

Coordinates

chr9:+:2504182..2510023

Molecular Weight (calculated)

46016.4 Da

IEP (calculated)

9.584

GRAVY (calculated)

-0.301

Length

415 amino acids

Sequence
(BLAST)

001: MLNFNRIRSQ PRTTRSMSLG GMDYVDPKRK GNFVGKVFLA AALTALCIIM IKRSPSLNPP SPFSIHEPGV THVLVTGGAG YIGSHATLRL LRENYRVTIV
101: DNLSRGNLGA VRVLQDLFPE PGRLQFIYAD LGDKESVNKI FSENKFDAVM HFAAVAYVGE STLDPLKYYH NITSNTLLVL ESMAKYGVKT LIYSSTCATY
201: GEPEKMPIIE TTEQKPINPY GKAKKMAEDI ILDFSKNSKM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGITTGLKV RGTDYKTPDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPAKVGI YNVGTGKGRS VKEFVNACKK ATGVDIKVDY LPRRPGDYAE VYSDPSKINR ELNWTAQYTD LEKSLQVAWK
401: WQKAHRNGYG ISSAI

Best Arabidopsis Sequence Match ( AT1G30620.1 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.