CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 5
cytosol 1
endoplasmic reticulum 3
golgi 3
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	98.17	98.17
AT4G00110.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	85.84	87.44
VIT_15s0048g00340.t01	Wine grape	endoplasmic reticulum, plastid	85.62	86.61
CDY63064	Canola	cytosol, endoplasmic reticulum, golgi, plastid	84.47	86.05
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	84.47	86.05
PGSC0003DMT400066897	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	84.47	85.85
Solyc01g091200.2.1	Tomato	nucleus	84.93	85.52
VIT_15s0048g00330.t01	Wine grape	plastid	83.33	85.48
AT1G02000.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion, plastid	84.47	85.25
PGSC0003DMT400018060	Potato	cytosol, endoplasmic reticulum, golgi, plastid	83.11	83.68
Solyc05g050990.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion	82.88	83.45
PGSC0003DMT400024810	Potato	cytosol, endoplasmic reticulum, golgi, plastid	82.88	83.45
Solyc10g018260.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	82.42	82.99
VIT_15s0048g00320.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, mitochondrion	83.79	78.92
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	71.92	73.26
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	71.46	72.96
KRH02967	Soybean	nucleus	67.12	68.21
KRH40009	Soybean	plastid	63.24	68.06
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	66.89	67.98
KRH58854	Soybean	endoplasmic reticulum, golgi	61.64	64.9
KRG97348	Soybean	endoplasmic reticulum	61.87	61.73
KRH31569	Soybean	mitochondrion	64.38	61.04
KRH42756	Soybean	extracellular, golgi, plastid	61.42	54.56
KRH41129	Soybean	nucleus	20.78	26.0
KRH59827	Soybean	extracellular, golgi	20.55	25.71
KRH60045	Soybean	extracellular	20.32	25.43
KRH51264	Soybean	plastid	20.32	25.36
KRH41316	Soybean	extracellular, golgi	20.09	25.14
KRG99450	Soybean	cytosol, mitochondrion, nucleus	3.65	23.19
KRH00406	Soybean	cytosol, mitochondrion, nucleus	3.65	23.19
KRH26241	Soybean	cytosol	2.74	22.64
KRH43065	Soybean	golgi, mitochondrion, plastid	21.46	22.6
KRH77652	Soybean	plastid	19.86	22.25
KRH27832	Soybean	plastid	19.63	22.16
KRH59194	Soybean	golgi, mitochondrion	20.78	21.88
KRH11871	Soybean	golgi, plastid	20.55	21.69
KRH36892	Soybean	golgi, mitochondrion	20.55	21.69
KRH46062	Soybean	cytosol	20.55	14.71
KRH27429	Soybean	cytosol, mitochondrion, plastid	21.0	13.75
KRH21867	Soybean	cytosol, mitochondrion, plastid	21.0	13.75
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	20.55	13.64
KRH13001	Soybean	cytosol, mitochondrion, plastid	20.78	13.62
KRH43408	Soybean	nucleus	20.78	13.62
KRH04933	Soybean	cytosol, mitochondrion, plastid	19.41	13.2
KRH16155	Soybean	cytosol	18.95	12.67
KRH57264	Soybean	endoplasmic reticulum	2.05	4.31
KRH03995	Soybean	plastid	2.97	4.3
KRH77471	Soybean	cytosol, endoplasmic reticulum	2.51	3.96
KRH57441	Soybean	cytosol	2.28	3.22

Protein Annotations

EntrezGene:100788739	MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EMBL:ACUP02000582	InterPro:Epimerase_deHydtase
EnsemblPlantsGene:GLYMA_01G139500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662
UniProt:I1J7U8	EnsemblPlants:KRH76209	ProteinID:KRH76209	ProteinID:KRH76209.1	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim
PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF22	SUPFAM:SSF51735	TMHMM:TMhelix
UniParc:UPI00023376E8	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:46728345..46731227

Molecular Weight (calculated)

48609.4 Da

IEP (calculated)

10.332

GRAVY (calculated)

-0.197

Length

438 amino acids

Sequence
(BLAST)

001: MSQLKPMSHI DSAPSTPGKF KMEKASYFNR VRWHTSLAKL AVWSFVFLGA ILIFFLRSPA SSPVPADLSR RSLRTYNWGG PVWEKRVRAS AQIRSRNGFA
101: VLVTGAAGFV GTHVSAALKR RGDGVLGLDN FNDYYDPSLK RARQGLLERS GVYIVEGDIN DEALLRKLFE VVPFTHVMHL AAQAGVRYAM ENPGSYVHSN
201: IAGFVNLLEV CKSVNPQPAI VWASSSSVYG LNTKVPFSER DRTDQPASLY AATKKAGEEI AHTYNHIYGL SLTGLRFFTV YGPWGRPDMA YFFFTRDLLK
301: GKSIPIFEAA NHGTVARDFT YIDDIVRGCL GALDTAEKST GSGGKKRGPA QLRIFNLGNT SPVPVSDLVS ILERLLKVKA KRNIMKLPRN GDVQFTHANI
401: SYAQMELGYK PTTDLQSGLK KFVRWYLNYY SGGKKAVE

Best Arabidopsis Sequence Match ( AT4G00110.1 )
(BLAST)

001: MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS

Arabidopsis Description

GAE3GAE3 [Source:UniProtKB/TrEMBL;Acc:A0A178V2K1]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.