Factsheet for Bra037315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid

Predictor Summary:

nucleus 1
plastid 1
cytosol 1
endoplasmic reticulum 1
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63064	Canola	cytosol, endoplasmic reticulum, golgi, plastid	99.77	99.77
AT4G00110.1	Thale cress	cytosol, endoplasmic reticulum, golgi, plastid	95.35	95.35
PGSC0003DMT400066897	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	85.35	85.15
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	86.51	84.93
Solyc01g091200.2.1	Tomato	nucleus	85.81	84.83
KRH76209	Soybean	endoplasmic reticulum, plastid	86.05	84.47
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	83.95	82.99
Solyc05g050990.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion	83.72	82.76
PGSC0003DMT400024810	Potato	cytosol, endoplasmic reticulum, golgi, plastid	83.72	82.76
PGSC0003DMT400018060	Potato	cytosol, endoplasmic reticulum, golgi, plastid	83.72	82.76
Solyc10g018260.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	83.49	82.53
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	74.19	74.36
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	74.42	73.56
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	70.0	70.16
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	68.84	68.84
Bra014987.1-P	Field mustard	endoplasmic reticulum	66.74	63.22
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	66.74	62.94
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	66.74	62.39
Bra013744.1-P	Field mustard	cytosol, golgi	21.86	27.01
Bra016757.1-P	Field mustard	cytosol	21.4	26.21
Bra039253.1-P	Field mustard	cytosol	20.93	25.94
Bra027626.1-P	Field mustard	cytosol	21.16	25.93
Bra019785.1-P	Field mustard	cytosol	20.0	25.67
Bra035262.1-P	Field mustard	golgi	20.7	25.65
Bra019257.1-P	Field mustard	plastid	20.7	25.57
Bra027732.1-P	Field mustard	golgi	20.0	25.07
Bra033746.1-P	Field mustard	golgi	21.63	22.57
Bra027557.1-P	Field mustard	golgi	21.16	22.09
Bra020917.1-P	Field mustard	golgi, mitochondrion	20.47	21.41
Bra032409.1-P	Field mustard	mitochondrion	20.47	21.0
Bra030933.1-P	Field mustard	cytosol	8.6	20.0
Bra013466.1-P	Field mustard	mitochondrion	20.7	19.22
Bra005387.1-P	Field mustard	golgi, mitochondrion	20.0	18.94
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.86	14.14
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.63	13.92
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.4	13.83
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	21.4	13.73
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	21.4	13.69
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	20.0	13.35
Bra019776.1-P	Field mustard	cytosol	3.49	4.67
Bra027005.1-P	Field mustard	cytosol	3.02	4.38

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra037315	EnsemblPlants:Bra037315.1	EnsemblPlants:Bra037315.1-P
InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662
UniProt:M4F8A4	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574
PANTHER:PTHR43574:SF22	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0002541B14	SEG:seg	:

Description

AT4G00110 (E=1e-228) GAE3 | GAE3 (UDP-D-GLUCURONATE 4-EPIMERASE 3); UDP-glucuronate 4-epimerase/ catalytic

Coordinates

chrA09:+:1111265..1112557

Molecular Weight (calculated)

47642.1 Da

IEP (calculated)

10.494

GRAVY (calculated)

-0.247

Length

430 amino acids

Sequence
(BLAST)

001: MKHLDETPST PGKFKMDKSP YFLHRTRWQS SVAKLAFWSL VFVGFIFIFF YRSPSSLPDP SRRSLRTYSW GGPAWEKRVR SSAHVRTRRG VSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKPISVFQ
301: GANHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIVKMP RNGDVPFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS

Best Arabidopsis Sequence Match ( AT4G00110.1 )
(BLAST)

001: MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS

Arabidopsis Description

GAE3GAE3 [Source:UniProtKB/TrEMBL;Acc:A0A178V2K1]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.