Factsheet for Bra014987.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
endoplasmic reticulum 2
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77481	Canola	endoplasmic reticulum	99.78	100.0
CDX85133	Canola	endoplasmic reticulum	99.56	99.12
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	96.48	95.22
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	95.15	94.74
AT3G23820.1	Thale cress	endoplasmic reticulum	94.71	93.48
VIT_05s0029g00420.t01	Wine grape	endoplasmic reticulum	79.3	79.82
PGSC0003DMT400053071	Potato	cytosol, endoplasmic reticulum, golgi, plastid	75.77	76.79
KRH58854	Soybean	endoplasmic reticulum, golgi	70.04	76.44
Solyc09g092330.1.1	Tomato	nucleus	75.55	75.89
KRH31569	Soybean	mitochondrion	77.09	75.76
KRG97348	Soybean	endoplasmic reticulum	72.69	75.17
PGSC0003DMT400011867	Potato	cytosol, endoplasmic reticulum, golgi	74.23	74.23
PGSC0003DMT400040718	Potato	cytosol, endoplasmic reticulum, golgi	70.04	73.27
Solyc05g053790.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	68.28	71.59
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	65.64	68.51
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	65.64	67.27
GSMUA_Achr8P00950_001	Banana	cytosol, endoplasmic reticulum, golgi	65.42	67.04
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	63.22	66.74
GSMUA_Achr8P08790_001	Banana	endoplasmic reticulum, nucleus, peroxisome	64.32	65.77
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	62.11	65.73
KRH42756	Soybean	extracellular, golgi, plastid	70.93	65.31
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	62.33	65.06
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	60.79	64.34
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	59.69	63.02
GSMUA_Achr7P02740_001	Banana	endoplasmic reticulum	65.86	61.65
Zm00001d049804_P001	Maize	plasma membrane	60.35	61.16
Os08t0526100-01	Rice	plastid	63.0	59.83
Zm00001d021026_P001	Maize	endoplasmic reticulum	63.66	59.34
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	62.56	59.29
TraesCS5B01G280700.1	Wheat	endoplasmic reticulum	62.11	59.0
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	64.1	58.91
Os09t0504000-01	Rice	cytosol, endoplasmic reticulum, golgi	64.32	58.63
TraesCS5D01G288700.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	62.11	58.63
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	57.93	58.44
TraesCS7B01G153900.1	Wheat	plastid	63.22	58.33
TraesCS5A01G281600.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	61.89	58.3
TraesCS7A01G256600.1	Wheat	plastid	62.78	58.16
TraesCS7D01G257800.1	Wheat	plastid	62.78	58.16
HORVU7Hr1G053260.2	Barley	plastid	62.56	57.96
HORVU5Hr1G075660.1	Barley	plastid	62.33	55.71
Bra027732.1-P	Field mustard	golgi	20.48	27.11
Bra035262.1-P	Field mustard	golgi	20.7	27.09
Bra013744.1-P	Field mustard	cytosol, golgi	20.7	27.01
Bra016757.1-P	Field mustard	cytosol	20.7	26.78
Bra019257.1-P	Field mustard	plastid	20.26	26.44
Bra019785.1-P	Field mustard	cytosol	19.38	26.27
Bra027626.1-P	Field mustard	cytosol	20.26	26.21
Bra039253.1-P	Field mustard	cytosol	19.6	25.65
Bra032409.1-P	Field mustard	mitochondrion	20.7	22.43
Bra020917.1-P	Field mustard	golgi, mitochondrion	20.04	22.14
Bra027557.1-P	Field mustard	golgi	20.04	22.09
Bra033746.1-P	Field mustard	golgi	20.04	22.09
Bra030933.1-P	Field mustard	cytosol	8.37	20.54
Bra005387.1-P	Field mustard	golgi, mitochondrion	19.38	19.38
Bra013466.1-P	Field mustard	mitochondrion	19.6	19.22
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.7	14.14
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.7	14.07
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	20.48	13.98
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	20.48	13.88
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	19.38	13.66
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	20.04	13.54
Bra019776.1-P	Field mustard	cytosol	4.19	5.92
Bra027005.1-P	Field mustard	cytosol	3.74	5.72

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra014987	EnsemblPlants:Bra014987.1	EnsemblPlants:Bra014987.1-P
InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662
UniProt:M4DER5	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574
PANTHER:PTHR43574:SF10	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0002540DE6	SEG:seg	:

Description

AT3G23820 (E=7e-234) GAE6 | GAE6 (UDP-D-GLUCURONATE 4-EPIMERASE 6); UDP-glucuronate 4-epimerase/ catalytic

Coordinates

chrA07:-:4541830..4543194

Molecular Weight (calculated)

50212.0 Da

IEP (calculated)

10.092

GRAVY (calculated)

-0.273

Length

454 amino acids

Sequence
(BLAST)

001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LKASSKVLFR ATLLIALVLV LLFAVNYHPH SDSHHLHRRS FLSTGLFSSS SSSLGEGAAW EKRVRQSSTA
101: KRQHGLSVLV TGAAGFVGSH CSIALRKRGD GVLGFDNFND YYDPSLKRAR QHLLEKNQVF IVEGDLNDGP LLRKLFDIVP FTHVLHLAAQ AGVRYAMKNP
201: QSYISSNIAG LVNLLEVAKA ANPQPAIVWA SSSSVYGLNT ENPFSEEHRT DQPASLYAAT KKAGEEIAHT YNHIYGLSLT GLRFFTVYGP WGRPDMAYFF
301: FTKDILHGKS IDIYRTQDNQ EVARDFTYID DIVKGCVGAL DTAEKSTGSG GKKRGPAQLR VYNLGNTSPV PVGRLVSILE GLLGTKAKKH LIKMPRNGDV
401: PYTHANVSLA YRDFGYKPTT DLAAGLRKFV KWYVSYYGIQ PRVKKENSHA DESA

Best Arabidopsis Sequence Match ( AT3G23820.1 )
(BLAST)

001: MPLSATADTS KTVKLERYNS YLRKIHSTKV LNASSKVLFR ATLLVALVLV LIFAINYPPL SDSRAAAAHH LHRRSFLSTG LFSSSSSSSS IGGAAWEKRV
101: RQSSTAKRPH GLSVLVTGAA GFVGSHCSLA LRKRGDGVLG FDNFNDYYDP SLKRARQELL EKQQVFIVEG DLNDGPLLRK LFDVVPFTHI LHLAAQAGVR
201: YAMKNPQSYI ASNIAGFVNL LEVAKAANPQ PAIVWASSSS VYGLNTENPF SEEHRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP
301: DMAYFFFTKD ILHGKSIDIY RTQDNQEVAR DFTYIDDIVK GCVGALDTAE KSTGSGGKKR GQAQLRVYNL GNTSPVPVGR LVSILEGLLG TKAKKHLIKM
401: PRNGDVPYTH ANVSLAYKDF GYKPTTDLAA GLRKFVKWYV GYYGIQPRVK KETSHAEDSA

Arabidopsis Description

GAE6UDP-glucuronate 4-epimerase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIS3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.