Factsheet for Bra027732.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47846	Canola	golgi	100.0	100.0
CDY08378	Canola	golgi	99.71	99.13
AT1G64440.1	Thale cress	cytosol, golgi	92.71	91.38
Bra019257.1-P	Field mustard	plastid	79.88	78.74
Bra013744.1-P	Field mustard	cytosol, golgi	78.43	77.3
Bra035262.1-P	Field mustard	golgi	77.84	76.95
GSMUA_Achr4P02670_001	Banana	golgi	76.68	75.36
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	76.09	75.0
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	75.8	74.71
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	75.51	74.21
GSMUA_Achr5P09200_001	Banana	golgi	76.38	73.8
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	74.34	73.07
EER98731	Sorghum	plastid	69.97	65.57
Os09t0323000-01	Rice	cytosol	70.26	65.31
TraesCS5A01G183100.1	Wheat	plastid	70.85	64.8
TraesCS5B01G181300.1	Wheat	plastid	70.85	64.8
TraesCS5D01G188200.1	Wheat	plastid	70.85	64.8
Bra019785.1-P	Field mustard	cytosol	63.27	64.78
Bra016757.1-P	Field mustard	cytosol	66.18	64.67
Zm00001d005598_P001	Maize	plastid	68.8	64.66
HORVU5Hr1G055920.8	Barley	plastid	70.26	64.44
Bra027626.1-P	Field mustard	cytosol	64.72	63.25
Bra039253.1-P	Field mustard	cytosol	62.68	61.96
Os08t0374800-01	Rice	golgi	73.47	61.76
Zm00001d020093_P002	Maize	golgi	54.23	61.59
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	75.22	60.85
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	72.89	59.1
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	72.89	59.1
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	73.47	58.2
GSMUA_Achr9P06140_001	Banana	plastid	75.22	49.52
GSMUA_Achr6P26620_001	Banana	plastid	76.09	48.6
Bra032409.1-P	Field mustard	mitochondrion	43.44	35.56
Bra027557.1-P	Field mustard	golgi	42.27	35.19
Bra033746.1-P	Field mustard	golgi	41.69	34.71
Bra020917.1-P	Field mustard	golgi, mitochondrion	41.11	34.31
Bra005387.1-P	Field mustard	golgi, mitochondrion	43.44	32.82
Bra013466.1-P	Field mustard	mitochondrion	41.4	30.67
Bra030933.1-P	Field mustard	cytosol	11.37	21.08
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	25.95	20.75
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.66	20.51
Bra014987.1-P	Field mustard	endoplasmic reticulum	27.11	20.48
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	27.11	20.39
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	27.11	20.22
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	25.07	20.0
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.07	19.77
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	24.78	19.77
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	24.78	19.54
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	27.11	13.84
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	26.82	13.73
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	26.24	13.53
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	25.36	13.08
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	25.36	13.02
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	24.2	12.89
Bra027005.1-P	Field mustard	cytosol	3.79	4.38
Bra019776.1-P	Field mustard	cytosol	3.79	4.05

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra027732
EnsemblPlants:Bra027732.1	EnsemblPlants:Bra027732.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005795	GO:GO:0005975
GO:GO:0006012	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009969	GO:GO:0009987	GO:GO:0010053	GO:GO:0016853	GO:GO:0030154	GO:GO:0042546
UniProt:M4EG19	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725	PANTHER:PTHR43725:SF11
SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0002542292	SEG:seg	:

Description

AT1G64440 (E=4e-180) RHD1, REB1, UGE4 | RHD1 (ROOT HAIR DEFECTIVE 1); UDP-glucose 4-epimerase/ protein dimerization

Coordinates

chrA09:+:6586493..6588581

Molecular Weight (calculated)

37756.3 Da

IEP (calculated)

6.173

GRAVY (calculated)

-0.208

Length

343 amino acids

Sequence
(BLAST)

001: MVKNILVTGG AGYIGSHAVL QLLLRGYTAV VIDNLDNSSL VSIQRVKELA GDRGDNLTFH QVDLCDKPAL ERLFSQSKFD AVMHFAGLKA VGESVAKPLL
101: YYNNNLIGTI TLLEVMAAHG CKKLVFSSSA TVYGWPKEVP CTEESPLSGM SPYARTKLFI EDICRDVQRG DPEWRIIMLR YFNPVGAHPS GRIGEDPCGT
201: PNNLMPYVQQ VVVGRLPNLK IYGTDYTTKD GTGVRDYIHV VDLADGHISA LQKLEDSEIG CEVYNLGTGK GTTVLEMVDA FEKASGMKIP VVKVGRRPGD
301: AETVYASTEK AERELNWKPK YGIDEMCRDQ WNWASNNPLG YGS

Best Arabidopsis Sequence Match ( AT1G64440.1 )
(BLAST)

001: MVGNILVTGG AGYIGSHTVL QLLLGGYNTV VIDNLDNSSL VSIQRVKDLA GDHGQNLTVH QVDLRDKPAL EKVFSETKFD AVMHFAGLKA VGESVAKPLL
101: YYNNNLIATI TLLEVMAAHG CKKLVFSSSA TVYGWPKEVP CTEESPLSGM SPYGRTKLFI EDICRDVQRG DPEWRIIMLR YFNPVGAHPS GRIGEDPCGT
201: PNNLMPYVQQ VVVGRLPNLK IYGTDYTTKD GTGVRDYIHV VDLADGHICA LQKLDDTEIG CEVYNLGTGK GTTVLEMVDA FEKASGMKIP LVKVGRRPGD
301: AETVYASTEK AERELNWKAN FGIEEMCRDQ WNWASNNPFG YGSSPNST

Arabidopsis Description

UGE4UDP-glucose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W7]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.