Factsheet for Bra019257.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra019785.1-P
Bra035262.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G23920.1	Bra019785.1-P	AT1G12780.1	21798944
AT4G23920.1	Bra035262.1-P	AT4G10960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY50431	Canola	cytosol	97.7	97.7
AT4G23920.1	Thale cress	cytosol	95.11	94.57
Bra013744.1-P	Field mustard	cytosol, golgi	93.39	93.39
Bra035262.1-P	Field mustard	golgi	87.36	87.61
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	80.17	80.17
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	80.17	80.17
Bra027732.1-P	Field mustard	golgi	78.74	79.88
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	77.59	77.36
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	77.3	77.08
GSMUA_Achr5P09200_001	Banana	golgi	78.45	76.9
GSMUA_Achr4P02670_001	Banana	golgi	77.01	76.79
EER98731	Sorghum	plastid	71.26	67.76
Os09t0323000-01	Rice	cytosol	71.84	67.75
TraesCS5B01G181300.1	Wheat	plastid	72.99	67.73
TraesCS5D01G188200.1	Wheat	plastid	72.99	67.73
TraesCS5A01G183100.1	Wheat	plastid	72.99	67.73
HORVU5Hr1G055920.8	Barley	plastid	72.7	67.65
Zm00001d005598_P001	Maize	plastid	70.11	66.85
Bra019785.1-P	Field mustard	cytosol	64.08	66.57
Bra016757.1-P	Field mustard	cytosol	66.95	66.38
Zm00001d020093_P002	Maize	golgi	56.32	64.9
Bra027626.1-P	Field mustard	cytosol	65.23	64.67
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	78.45	64.39
Bra039253.1-P	Field mustard	cytosol	63.51	63.69
Os08t0374800-01	Rice	golgi	72.13	61.52
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	75.86	60.97
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	73.28	60.28
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	73.28	60.28
GSMUA_Achr9P06140_001	Banana	plastid	77.59	51.82
GSMUA_Achr6P26620_001	Banana	plastid	76.72	49.72
Bra027557.1-P	Field mustard	golgi	41.95	35.44
Bra032409.1-P	Field mustard	mitochondrion	42.53	35.32
Bra033746.1-P	Field mustard	golgi	41.67	35.19
Bra020917.1-P	Field mustard	golgi, mitochondrion	41.09	34.79
Bra005387.1-P	Field mustard	golgi, mitochondrion	41.95	32.16
Bra013466.1-P	Field mustard	mitochondrion	40.8	30.67
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	26.15	21.21
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	25.57	20.7
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	27.01	20.61
Bra030933.1-P	Field mustard	cytosol	10.92	20.54
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.0	20.28
Bra014987.1-P	Field mustard	endoplasmic reticulum	26.44	20.26
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	25.29	20.23
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	26.44	20.0
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	24.71	19.77
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	24.14	19.53
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	26.44	13.73
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	26.15	13.54
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	25.29	13.23
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	24.71	12.93
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	23.85	12.89
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	24.71	12.87
Bra027005.1-P	Field mustard	cytosol	4.02	4.71
Bra019776.1-P	Field mustard	cytosol	3.74	4.05

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra019257
EnsemblPlants:Bra019257.1	EnsemblPlants:Bra019257.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	GO:GO:0016857	UniProt:M4DRW4
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF16363	PRINTS:PR01713	PANTHER:PTHR43725
PANTHER:PTHR43725:SF11	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0002540F67	:

Description

AT4G23920 (E=4e-196) UGE2 | UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2); UDP-glucose 4-epimerase/ protein dimerization

Coordinates

chrA03:+:25397549..25399787

Molecular Weight (calculated)

38329.6 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.248

Length

348 amino acids

Sequence
(BLAST)

001: MAKNILVTGG SGYIGSHTVL QLLNGGYSAV VVDNLDNSSA VSLERVKKLA GQNGDRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTI TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DPEWKIILLR YFNPVGAHPS GYIGEDPLGI
201: PNNLMPYIQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV IDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEIVYASTEK AERELNWKAK YGIEEMCRDL WNWASNNPYG YDSSNGSS

Best Arabidopsis Sequence Match ( AT4G23920.1 )
(BLAST)

001: MAKSVLVTGG AGYIGSHTVL QLLEGGYSAV VVDNYDNSSA ASLQRVKKLA GENGNRLSFH QVDLRDRPAL EKIFSETKFD AVIHFAGLKA VGESVEKPLL
101: YYNNNIVGTV TLLEVMAQYG CKNLVFSSSA TVYGWPKEVP CTEESPISAT NPYGRTKLFI EEICRDVHRS DSEWKIILLR YFNPVGAHPS GYIGEDPLGV
201: PNNLMPYVQQ VAVGRRPHLT VFGTDYKTKD GTGVRDYIHV MDLADGHIAA LRKLDDLKIS CEVYNLGTGN GTSVLEMVAA FEKASGKKIP LVMAGRRPGD
301: AEVVYASTEK AERELNWKAK NGIEEMCRDL WNWASNNPYG YNSSSNGSSS

Arabidopsis Description

UGE2UDP-glucose 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.