Factsheet for Bra035262.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	golgi
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86828	Canola	golgi	100.0	100.0
CDY40862	Canola	cytosol, golgi	99.14	99.14
AT4G10960.1	Thale cress	golgi	94.24	93.16
Bra019257.1-P	Field mustard	plastid	87.61	87.36
Bra013744.1-P	Field mustard	cytosol, golgi	85.88	85.63
Bra027732.1-P	Field mustard	golgi	76.95	77.84
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	77.81	77.59
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	77.52	77.3
GSMUA_Achr5P09200_001	Banana	golgi	76.95	75.21
GSMUA_Achr9P00170_001	Banana	extracellular, golgi	75.5	75.07
GSMUA_Achr6P22620_001	Banana	golgi, mitochondrion	75.5	75.07
GSMUA_Achr4P02670_001	Banana	golgi	73.49	73.07
Os09t0323000-01	Rice	cytosol	71.47	67.21
HORVU5Hr1G055920.8	Barley	plastid	72.33	67.11
Zm00001d005598_P001	Maize	plastid	70.32	66.85
TraesCS5D01G188200.1	Wheat	plastid	71.76	66.4
TraesCS5B01G181300.1	Wheat	plastid	71.76	66.4
TraesCS5A01G183100.1	Wheat	plastid	71.76	66.4
EER98731	Sorghum	plastid	70.03	66.39
Bra019785.1-P	Field mustard	cytosol	63.69	65.97
Bra016757.1-P	Field mustard	cytosol	66.57	65.81
GSMUA_Achr8P27530_001	Banana	cytosol, golgi, plastid	78.1	63.92
Bra027626.1-P	Field mustard	cytosol	64.55	63.82
Zm00001d020093_P002	Maize	golgi	54.76	62.91
Bra039253.1-P	Field mustard	cytosol	62.82	62.82
Os08t0374800-01	Rice	golgi	71.76	61.03
GSMUA_Achr3P16370_001	Banana	golgi, mitochondrion, plastid	75.79	60.74
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	72.91	59.81
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	72.91	59.81
GSMUA_Achr9P06140_001	Banana	plastid	76.37	50.86
GSMUA_Achr6P26620_001	Banana	plastid	76.66	49.53
Bra027557.1-P	Field mustard	golgi	42.07	35.44
Bra033746.1-P	Field mustard	golgi	41.79	35.19
Bra032409.1-P	Field mustard	mitochondrion	42.36	35.08
Bra020917.1-P	Field mustard	golgi, mitochondrion	40.63	34.31
Bra005387.1-P	Field mustard	golgi, mitochondrion	41.5	31.72
Bra013466.1-P	Field mustard	mitochondrion	40.92	30.67
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	26.51	21.45
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	27.38	20.83
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.65	20.75
Bra014987.1-P	Field mustard	endoplasmic reticulum	27.09	20.7
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	25.65	20.7
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	27.38	20.65
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	25.65	20.46
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	25.07	20.0
Bra030933.1-P	Field mustard	cytosol	10.66	20.0
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	24.5	19.77
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	25.07	12.95
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	24.78	12.84
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.92	12.48
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.63	12.28
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.34	12.18
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	22.48	12.11
Bra027005.1-P	Field mustard	cytosol	3.46	4.04
Bra019776.1-P	Field mustard	cytosol	3.46	3.74

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra035262
EnsemblPlants:Bra035262.1	EnsemblPlants:Bra035262.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	GO:GO:0016857	UniProt:M4F2G4
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF16363	PRINTS:PR01713	PANTHER:PTHR43725
PANTHER:PTHR43725:SF11	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0002546CE7	:

Description

AT4G10960 (E=7e-194) UGE5 | UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5); UDP-glucose 4-epimerase/ protein dimerization

Coordinates

chrA08:+:9688731..9691145

Molecular Weight (calculated)

38100.1 Da

IEP (calculated)

5.252

GRAVY (calculated)

-0.249

Length

347 amino acids

Sequence
(BLAST)

001: MVSKNVLVTG GAGYIGSHTV LQLLTGGYSA VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRPA LEKIFSETKF DAVIHFAGLK AVGESVDKPL
101: LYYNNNLAGT ITLLEVMAQY NCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIVLL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVYGNDYNTV DGTGVRDYIH VMDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVTAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD SWNWTSNNPY GYDSSDA

Best Arabidopsis Sequence Match ( AT4G10960.1 )
(BLAST)

001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H

Arabidopsis Description

UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.