Factsheet for Bra029444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

nucleus 1
cytosol 2
endoplasmic reticulum 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	98.62	98.85
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	94.48	94.27
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	92.18	93.47
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	41.84	77.12
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	74.02	75.06
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	74.02	74.88
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	66.44	74.48
Bra037315.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion, plastid	73.56	74.42
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	74.02	74.02
Bra000385.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	72.64	72.64
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	73.33	71.52
Solyc08g079440.1.1	Tomato	nucleus	73.1	71.46
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	66.21	66.98
Bra011194.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	65.29	66.2
Bra024075.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi, plastid	63.91	64.65
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	67.82	64.27
Bra014987.1-P	Field mustard	endoplasmic reticulum	65.06	62.33
Bra001923.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	65.06	62.06
Bra028348.1-P	Field mustard	endoplasmic reticulum, golgi, nucleus	65.06	61.52
Os03t0249500-01	Rice	plastid	66.21	59.5
TraesCS4A01G080300.1	Wheat	plastid	64.83	59.0
Zm00001d028427_P001	Maize	plastid	64.83	58.87
EER95171	Sorghum	plastid	64.83	58.75
TraesCS4D01G224000.1	Wheat	plastid	65.06	58.71
Zm00001d047915_P001	Maize	plastid	64.37	58.46
TraesCS4B01G223700.1	Wheat	plastid	65.06	57.64
HORVU4Hr1G063010.1	Barley	peroxisome	64.83	54.86
Bra013744.1-P	Field mustard	cytosol, golgi	21.61	27.01
Bra016757.1-P	Field mustard	cytosol	21.61	26.78
Bra019785.1-P	Field mustard	cytosol	20.46	26.57
Bra027626.1-P	Field mustard	cytosol	21.38	26.5
Bra035262.1-P	Field mustard	golgi	20.46	25.65
Bra039253.1-P	Field mustard	cytosol	20.23	25.36
Bra019257.1-P	Field mustard	plastid	20.23	25.29
Bra027732.1-P	Field mustard	golgi	19.54	24.78
Bra020917.1-P	Field mustard	golgi, mitochondrion	21.38	22.63
Bra032409.1-P	Field mustard	mitochondrion	21.61	22.43
Bra033746.1-P	Field mustard	golgi	21.15	22.33
Bra027557.1-P	Field mustard	golgi	20.92	22.09
Bra013466.1-P	Field mustard	mitochondrion	21.38	20.09
Bra005387.1-P	Field mustard	golgi, mitochondrion	20.92	20.04
Bra030933.1-P	Field mustard	cytosol	8.51	20.0
Bra027310.1-P	Field mustard	cytosol, mitochondrion, peroxisome	22.07	14.44
Bra026009.1-P	Field mustard	cytosol, mitochondrion, plastid	22.07	14.29
Bra038127.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.84	14.22
Bra035048.1-P	Field mustard	cytosol, mitochondrion, plastid	21.84	14.18
Bra039675.1-P	Field mustard	cytosol, mitochondrion, peroxisome	21.61	14.14
Bra021578.1-P	Field mustard	cytosol, mitochondrion, plastid	20.46	13.82
Bra027005.1-P	Field mustard	cytosol	3.22	4.71
Bra019776.1-P	Field mustard	cytosol	3.45	4.67

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EnsemblPlantsGene:Bra029444	EnsemblPlants:Bra029444.1	EnsemblPlants:Bra029444.1-P
InterPro:Epimerase_deHydtase	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662
UniProt:M4EKX7	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574
PANTHER:PTHR43574:SF21	SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0002542794	SEG:seg	:

Description

AT4G12250 (E=3e-205) GAE5 | GAE5 (UDP-D-GLUCURONATE 4-EPIMERASE 5); UDP-glucuronate 4-epimerase/ catalytic

Coordinates

chrA09:+:18037637..18039027

Molecular Weight (calculated)

48070.3 Da

IEP (calculated)

10.461

GRAVY (calculated)

-0.241

Length

435 amino acids

Sequence
(BLAST)

001: MSHLDDLPST PGKYKTDKAL PYGILHHHRY LRLSKPTLWA SLFLALFLFY LLLSPPPTPS RRSLNDSSLS SAKYGGSQWE KKVRKSAHPR SRGGLTVLVT
101: GAAGFVGTHV SIALRRRGDG VLGLDNFNRY YDPKLKRARQ GLLERSGVFV VEGDINDAVL LKKLYDVVLF THVMHLAAQA GVRYAMQNPG SYVSSNIAGF
201: VNLLEVSKSA NPQPAVVWAS SSSVYGLNKK VPFSEKDRTD HPASLYAATK KAGEGIAHTY NHIYGLSLTG LRFFTVYGPW GRPDMAYFFF TKDILKGKTI
301: TVFESPDKGS VARDFTYIDD IVKGCLGALD TAEKSTGSGG KKKGPAMFRI YNLGNTSPVP VTKLVKILEK LLKMKAKKKV MPLPRNGDVE FTHANITLAQ
401: TEIGYKPAVD LETGLKKFVK WYMGFYSGSK KKSSW

Best Arabidopsis Sequence Match ( AT4G12250.1 )
(BLAST)

001: MSHLDDLPST PGKYKTDKVP PYGILHHHRY LRLSKLTLWA SLFLALFLFY LVLSPPPSPS RRNLNDSSSI SAAKYGGSHW EKQVRKSARP RSHGGLTVLV
101: TGASGFVGTH VSIALRRRGD GVLGLDNFNR YYDPKLKRAR QGLLERSGVF VVEGDINDAV LLRKLFDVVL FTHVMHLAAQ AGVRYAMQNP GSYVNSNIAG
201: FVNLLEVSKS ANPQPAIVWA SSSSVYGLNS KVPFSEKDRT DQPASLYAAT KKAGEGIAHT YNHIYGLSLT GLRFFTVYGP WGRPDMAYFF FTKDILKGKT
301: ITVFESPDKG SVARDFTYID DIVKGCLGAL DTAEKSTGSG GKKKGPAMFR IYNLGNTSPV PVTKLVTILE KLLKMKAKKK IMPLPRNGDV EFTHANITLA
401: QAELGYKPAV DLETGLKKFV KWYMGFYTGS KKKSSW

Arabidopsis Description

GAE5GAE5 [Source:UniProtKB/TrEMBL;Acc:A0A178UUD1]
SUBAcon: [endoplasmic reticulum,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.