Factsheet for PGSC0003DMT400010106

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2
endoplasmic reticulum 2
golgi 3
extracellular 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi, plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g079440.1.1	Tomato	nucleus	97.53	97.75
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	41.48	78.39
PGSC0003DMT400066897	Potato	endoplasmic reticulum, golgi, mitochondrion, plastid	72.2	74.71
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	71.3	74.13
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	64.35	73.97
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	71.3	73.95
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	72.2	73.85
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	71.97	73.79
PGSC0003DMT400059215	Potato	plastid	36.77	73.54
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	70.63	73.43
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	70.63	73.43
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	71.52	73.33
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	71.3	73.27
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	70.4	73.19
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	71.3	73.1
PGSC0003DMT400018060	Potato	cytosol, endoplasmic reticulum, golgi, plastid	70.85	72.64
PGSC0003DMT400024810	Potato	cytosol, endoplasmic reticulum, golgi, plastid	70.4	72.18
PGSC0003DMT400059216	Potato	cytosol	23.32	69.33
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	64.57	66.98
PGSC0003DMT400020223	Potato	endoplasmic reticulum	62.78	64.97
PGSC0003DMT400029181	Potato	cytosol, golgi, peroxisome	61.44	64.47
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	65.25	63.4
PGSC0003DMT400040718	Potato	cytosol, endoplasmic reticulum, golgi	59.42	61.06
PGSC0003DMT400011867	Potato	cytosol, endoplasmic reticulum, golgi	61.66	60.57
PGSC0003DMT400053071	Potato	cytosol, endoplasmic reticulum, golgi, plastid	60.54	60.27
Zm00001d047915_P001	Maize	plastid	60.54	56.37
EER95171	Sorghum	plastid	60.31	56.04
Zm00001d028427_P001	Maize	plastid	60.09	55.95
Os03t0249500-01	Rice	plastid	60.09	55.37
TraesCS4A01G080300.1	Wheat	plastid	58.97	55.02
TraesCS4D01G224000.1	Wheat	plastid	58.74	54.36
TraesCS4B01G223700.1	Wheat	plastid	58.74	53.36
HORVU4Hr1G063010.1	Barley	peroxisome	58.74	50.97
PGSC0003DMT400012829	Potato	cytosol, extracellular, golgi	21.3	27.3
PGSC0003DMT400007898	Potato	cytosol	21.3	27.07
PGSC0003DMT400031994	Potato	golgi	20.4	25.93
PGSC0003DMT400041159	Potato	golgi, mitochondrion	22.2	25.52
PGSC0003DMT400080637	Potato	golgi	22.65	25.25
PGSC0003DMT400054459	Potato	mitochondrion	21.75	23.26
PGSC0003DMT400054754	Potato	cytosol, mitochondrion, plastid	22.42	14.84
PGSC0003DMT400018192	Potato	cytosol, mitochondrion, plastid	21.97	14.54
PGSC0003DMT400075973	Potato	cytosol, mitochondrion, peroxisome	20.85	14.22
PGSC0003DMT400058533	Potato	cytosol	3.14	4.65

Protein Annotations

EntrezGene:102581503	MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005768	GO:GO:0005794
GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016857	UniProt:M0ZXH7	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF16363
EnsemblPlantsGene:PGSC0003DMG400003960	PGSC:PGSC0003DMG400003960	EnsemblPlants:PGSC0003DMT400010106	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF21
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI0002958A1A	RefSeq:XP_006363737.1	SEG:seg	:

Description

UDP-D-glucuronate 4-epimerase 5 [Source:PGSC_GENE;Acc:PGSC0003DMG400003960]

Coordinates

chr8:+:53137432..53139304

Molecular Weight (calculated)

49592.1 Da

IEP (calculated)

10.578

GRAVY (calculated)

-0.204

Length

446 amino acids

Sequence
(BLAST)

001: MTQLKPILTH LDSIPSTPGK FKPDKSSPYN LYRLRFHPTL FPRFTLWSFF FIFFIVLLIF FSSPTNPTTG NSRRSLKNSL SPSPPLGPNW ERRVRASARP
101: RSKTGFTVLV TGAAGFVGTH VSLGLKRRGD GVLGLDNFNQ YYDVGLKKAR QGLLERSGIM VVEGDINDAV LLRKLFDAVA FTHVMHMAAQ AGVRYAMQNP
201: GSYVHSNIAG FVSLLEACKM ANPQPSIVWA SSSSVYGLNS KVPFSEKDRT DQPASLYAAT KKAGEEIAHT YNHIYGLSIT GLRFFTVYGP WGRPDMAYFF
301: FTKDILRGKE IKIFETSDHG SVARDFTYVD DVVMGCLAAL DTAKKSTGSG GKKKGAAQLR IYNLGNTKPV PVGRLVSILE KLLKVKAKKK VIQMPRNGDV
401: PFTHANITLA HTELGYKPTT DLEMGLKKFV KWYVSYYGSK KKKSSW

Best Arabidopsis Sequence Match ( AT1G02000.1 )
(BLAST)

001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA

Arabidopsis Description

GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.