Factsheet for HORVU4Hr1G063010.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G224000.1	Wheat	plastid	92.02	98.13
TraesCS4A01G080300.1	Wheat	plastid	91.25	98.12
TraesCS4B01G223700.1	Wheat	plastid	92.22	96.54
EER95171	Sorghum	plastid	85.8	91.88
Zm00001d028427_P001	Maize	plastid	85.21	91.44
Os03t0249500-01	Rice	plastid	85.6	90.91
Zm00001d047915_P001	Maize	plastid	84.24	90.4
VIT_02s0241g00180.t01	Wine grape	cytosol, plastid	33.46	72.88
GSMUA_Achr4P17900_001	Banana	endoplasmic reticulum, mitochondrion, peroxisome	59.92	71.63
GSMUA_Achr5P18760_001	Banana	endoplasmic reticulum, golgi, mitochondrion	62.84	70.37
VIT_00s1525g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	56.61	66.9
VIT_00s2240g00010.t01	Wine grape	cytosol, endoplasmic reticulum, golgi, plastid	50.19	66.49
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	55.06	65.97
PGSC0003DMT400059215	Potato	plastid	28.6	65.92
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	55.06	65.81
CDX94504	Canola	cytosol, endoplasmic reticulum, peroxisome	55.25	65.29
CDX86716	Canola	cytosol, endoplasmic reticulum, peroxisome	55.06	65.21
AT4G12250.1	Thale cress	cytosol, endoplasmic reticulum, golgi	55.06	64.91
Bra029444.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	54.86	64.83
Bra033116.1-P	Field mustard	cytosol, endoplasmic reticulum, golgi	54.09	64.8
CDX97356	Canola	cytosol, endoplasmic reticulum, golgi	54.09	64.8
CDY04398	Canola	cytosol, endoplasmic reticulum, golgi	54.09	64.8
HORVU5Hr1G060660.3	Barley	mitochondrion	48.64	63.61
VIT_16s0022g01450.t01	Wine grape	mitochondrion	50.0	62.99
KRH40009	Soybean	plastid	49.42	62.41
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	52.14	60.5
Solyc08g079440.1.1	Tomato	nucleus	51.56	59.55
PGSC0003DMT400010106	Potato	cytosol, endoplasmic reticulum, golgi, plastid	50.97	58.74
HORVU7Hr1G053260.2	Barley	plastid	51.95	54.49
HORVU5Hr1G075660.1	Barley	plastid	52.72	53.35
HORVU5Hr1G055920.8	Barley	plastid	17.51	24.06
HORVU5Hr1G080860.10	Barley	mitochondrion	18.68	22.64
HORVU7Hr1G074300.2	Barley	golgi	16.73	21.23
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	16.73	20.87
HORVU5Hr1G077110.3	Barley	mitochondrion	16.93	20.67
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	13.62	18.57
HORVU4Hr1G059120.2	Barley	plastid	17.51	12.45
HORVU5Hr1G007050.2	Barley	plastid	17.51	12.41
HORVU6Hr1G065690.1	Barley	peroxisome, plastid	2.14	3.45

Protein Annotations

MapMan:3.13.4.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	UniProt:A0A287PC09	InterPro:Epimerase_deHydtase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016857	GO:GO:0050662	EnsemblPlantsGene:HORVU4Hr1G063010	EnsemblPlants:HORVU4Hr1G063010.1
InterPro:NAD(P)-bd_dom_sf	InterPro:Nuc_sugar_epim	PFAM:PF01370	PRINTS:PR01713	PANTHER:PTHR43574	PANTHER:PTHR43574:SF22
SUPFAM:SSF51735	TMHMM:TMhelix	UniParc:UPI000B47D24F	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:+:526927535..526929340

Molecular Weight (calculated)

54799.3 Da

IEP (calculated)

10.420

GRAVY (calculated)

-0.239

Length

514 amino acids

Sequence
(BLAST)

001: MMTPSAAPAP NQSRDPAGGG GQPALPQIEM APQLTGAPGS AAAAAGAAPA KPQFHHYHHH HRLAPRHHHP PSLLSKLAFW SVCSLSLLLA FLLLAPSSAP
101: SPRASPDSPR RSLHAHPDSA AAWGGAAWEK KVRASARARR PGGRXAGLSV LVTGAAGFVG CHAAAALRRR GDGVLGLDNF NDYYDPALKR GRAALLARSG
201: VYVVDGDIAD AELLAKLFDV APFTHVLHLA AQAGVRHALV DPMSYVRANV AGLVALLEAA RAADPQPAIV WASSSSVYGL NSHVPFSEHD RTDRPASLYA
301: ATKKAGEEIA HVYNHIYGLS LTALRFFTVY GPWGRPDMAY FFFTRDILAG RPITVYESSG GGTHQTTISR DFTYIDDIVK GCIGALDTAG RSTGSGGKKR
401: GPAPFRTYNL GNTSPVPVTQ LVDLLEKMLK VKAVRRVVKM PRNGDVPYTH ANISLAQREL GYRPSTDLQT GLKKFVRWYL EYYNPELAVK QKQHGSSNGK
501: GSRGRNGSTS SSAR

Best Arabidopsis Sequence Match ( AT1G02000.1 )
(BLAST)

001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA

Arabidopsis Description

GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.