Factsheet for HORVU5Hr1G077110.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G291300.1	Wheat	golgi	98.57	98.57
TraesCS5D01G298700.1	Wheat	mitochondrion	98.1	98.1
TraesCS5B01G290300.1	Wheat	mitochondrion	97.86	97.86
Os07t0139400-01	Rice	plasma membrane	90.26	90.26
EER95854	Sorghum	mitochondrion, plastid	88.36	86.51
CDY71965	Canola	cytosol, mitochondrion	46.79	82.77
AT2G34850.2	Thale cress	cytosol	46.08	82.2
Solyc07g043550.2.1	Tomato	cytosol, unclear	58.91	82.12
GSMUA_Achr4P31860_001	Banana	mitochondrion	79.33	80.29
VIT_10s0003g05640.t01	Wine grape	golgi	79.33	79.9
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	76.48	78.16
AT4G20460.1	Thale cress	golgi, mitochondrion	76.25	78.1
CDX78998	Canola	mitochondrion	76.01	77.86
HORVU7Hr1G074300.2	Barley	golgi	74.82	77.78
CDX82768	Canola	mitochondrion	75.77	77.62
PGSC0003DMT400080637	Potato	golgi	73.4	77.25
CDY09555	Canola	mitochondrion	76.72	76.9
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	76.01	76.74
KRH36892	Soybean	golgi, mitochondrion	75.53	76.63
AT1G30620.4	Thale cress	golgi, mitochondrion	76.25	76.61
Bra032409.1-P	Field mustard	mitochondrion	76.25	76.61
CDY02312	Canola	mitochondrion	76.25	76.43
PGSC0003DMT400041159	Potato	golgi, mitochondrion	70.31	76.29
PGSC0003DMT400054459	Potato	mitochondrion	75.53	76.26
CDY52524	Canola	golgi	76.72	76.18
Bra020917.1-P	Field mustard	golgi, mitochondrion	74.35	76.16
KRH11871	Soybean	golgi, plastid	75.06	76.14
Solyc02g030230.2.1	Tomato	mitochondrion	74.82	75.72
KRH59194	Soybean	golgi, mitochondrion	74.82	75.72
CDY31644	Canola	golgi	76.25	75.71
KRH43065	Soybean	golgi, mitochondrion, plastid	74.35	75.24
Bra027557.1-P	Field mustard	golgi	73.16	74.76
CDY13102	Canola	golgi	73.16	74.76
CDY29113	Canola	golgi	73.16	74.76
Bra033746.1-P	Field mustard	golgi	72.68	74.27
CDY49015	Canola	golgi	72.45	74.03
CDY49498	Canola	golgi	71.97	73.54
Solyc12g006410.1.1	Tomato	unclear	68.88	72.68
Bra005387.1-P	Field mustard	golgi, mitochondrion	76.96	71.37
AT5G44480.1	Thale cress	mitochondrion	72.68	70.18
Bra013466.1-P	Field mustard	mitochondrion	74.58	67.82
HORVU5Hr1G055920.8	Barley	plastid	35.15	39.57
HORVU5Hr1G080860.10	Barley	mitochondrion	34.44	34.2
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	29.69	33.16
HORVU5Hr1G060660.3	Barley	mitochondrion	20.9	22.39
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	19.95	18.96
HORVU7Hr1G053260.2	Barley	plastid	21.85	18.78
HORVU5Hr1G075660.1	Barley	plastid	20.67	17.13
HORVU4Hr1G063010.1	Barley	peroxisome	20.67	16.93
HORVU4Hr1G059120.2	Barley	plastid	21.38	12.45
HORVU5Hr1G007050.2	Barley	plastid	20.9	12.14
HORVU6Hr1G065690.1	Barley	peroxisome, plastid	2.61	3.45

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	UniProt:A0A287RVJ4
GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005575	GO:GO:0005975	GO:GO:0006012
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	EnsemblPlantsGene:HORVU5Hr1G077110
EnsemblPlants:HORVU5Hr1G077110.3	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349	PANTHER:PTHR43349:SF18
SUPFAM:SSF51735	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E	UniParc:UPI0000683C14	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:552726671..552729612

Molecular Weight (calculated)

46766.3 Da

IEP (calculated)

9.020

GRAVY (calculated)

-0.260

Length

421 amino acids

Sequence
(BLAST)

001: MLPTGRSRPQ PRPAPRSWSF SDMDFSDPKR KSRYLSKIIM VALLTAMCVV MLTQPPCHRK APSVFSIHEL GVTHVLVTGG AGYIGSHAAL RLLNDSFRVT
101: IVDNLSRGNI GAVKVLQNLF PDPGRLQFIH ADLGDAKAVN RIFAENAFDA VMHFAAVAYV GESTLEPLRY YHNITANTLV VLEAMAMHNV KTLIYSSTCA
201: TYGEPEKMPI TEETPQFPIN PYGKAKKMAE DIILDFSKSR KSDMSVMILR YFNVIGSDPE GRLGEAPPPE LREHGRISGA CFDAALGIIP GLKVKGTDYE
301: TPDGTCVRDY IDVTDLVDAH VKALNKAERG KVGIYNVGTG RGRSVKEFVE ACKKATGVDI KVDYFPRRPG DYAEVYSNPA RINRELNWTA QHTELQESLR
401: VAWTWQKKHR SGYADSGRYI L

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.