Factsheet for HORVU5Hr1G080860.10

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G080860.10

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G12780.1	HORVU5Hr1G080860.10	AT1G12780.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G314800.1	Wheat	cytosol	85.14	98.1
TraesCS5D01G321100.1	Wheat	cytosol	84.67	97.29
TraesCS5B01G315700.1	Wheat	cytosol	84.43	97.28
KXG36042	Sorghum	cytosol	68.87	80.22
Zm00001d021249_P003	Maize	cytosol	68.63	80.17
KRH00406	Soybean	cytosol, mitochondrion, nucleus	12.5	76.81
Os09t0526700-01	Rice	cytosol	67.22	76.41
KRG99450	Soybean	cytosol, mitochondrion, nucleus	12.26	75.36
KRH41129	Soybean	nucleus	58.96	71.43
KRH59827	Soybean	extracellular, golgi	58.96	71.43
Bra016757.1-P	Field mustard	cytosol	58.96	71.23
CDY31278	Canola	cytosol	58.96	71.23
AT1G12780.1	Thale cress	cytoskeleton, cytosol, peroxisome	58.73	70.94
CDY21065	Canola	cytosol	58.73	70.94
GSMUA_Achr1P18740_001	Banana	cytosol	59.2	70.9
CDY49193	Canola	cytosol	58.02	70.09
CDY47346	Canola	cytosol	58.02	70.09
Bra027626.1-P	Field mustard	cytosol	57.55	69.52
AT1G63180.1	Thale cress	cytosol	57.31	69.23
GSMUA_Achr5P13620_001	Banana	cytosol	57.31	69.23
VIT_02s0025g04210.t01	Wine grape	cytosol	57.08	69.14
Bra019785.1-P	Field mustard	cytosol	54.48	68.96
CDY69000	Canola	cytosol	54.48	68.96
Solyc08g080570.2.1	Tomato	cytosol	57.08	68.95
PGSC0003DMT400007898	Potato	cytosol	56.84	68.66
KRH51264	Soybean	plastid	56.37	68.09
Bra039253.1-P	Field mustard	cytosol	55.42	67.72
HORVU5Hr1G055920.8	Barley	plastid	50.94	57.75
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	43.87	49.34
CDY60264	Canola	plastid	58.96	40.92
HORVU5Hr1G077110.3	Barley	mitochondrion	34.2	34.44
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	33.25	34.22
HORVU7Hr1G074300.2	Barley	golgi	32.55	34.07
HORVU5Hr1G060660.3	Barley	mitochondrion	21.7	23.41
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	23.11	22.12
HORVU4Hr1G063010.1	Barley	peroxisome	22.64	18.68
HORVU7Hr1G053260.2	Barley	plastid	20.99	18.16
HORVU5Hr1G075660.1	Barley	plastid	20.52	17.13
HORVU4Hr1G059120.2	Barley	plastid	20.28	11.89
HORVU5Hr1G007050.2	Barley	plastid	20.05	11.72
HORVU6Hr1G065690.1	Barley	peroxisome, plastid	2.36	3.13

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.8	UniProt:A0A287RZM6	GO:GO:0003674	GO:GO:0003824
GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853
EnsemblPlantsGene:HORVU5Hr1G080860	EnsemblPlants:HORVU5Hr1G080860.10	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43725
PANTHER:PTHR43725:SF9	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI000B483A47	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:562261970..562264131

Molecular Weight (calculated)

46563.5 Da

IEP (calculated)

9.041

GRAVY (calculated)

-0.404

Length

424 amino acids

Sequence
(BLAST)

001: AYVHTRAQNP QRNGRKGRGR GSEGRMAIGG VGAGGGAGSV EGQQGRSVLV TGGAGFIGTH TVLRLLEKGY AVTAVDNFHN SVPEALDRVR HIVGPALSAR
101: LQFIFGDLTI KDDLEKVFAA KRYDAVIHFA GLKAVAESVA HPEMYNRNNI VGTVNLYDVM KKHGCNKLVF SSSATVYGQP EKVPCVEDSP LKALNPYGRT
201: KLYLEEMLRD YQHANPEWRT ILLRYFNPIG AHQSGDIGED PKGVPNNLLP YIQQVAVGRR PELNVYGHDY RTRDGTAVRD YIHVVDLADG HIAALEKLFA
301: TPDIGTSVRP PAQATNKPTC YQCVHRLIVS LLSGCVAYNL GTGRGTTVLE MVSAFEKAYG KKIPVKMCPR RPGDSEQVYA STAKAEQELG WRAKYGIEEM
401: CRDQWNWARK NPYGYCGDAA ENKD

Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)

001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L

Arabidopsis Description

UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.