Factsheet for HORVU6Hr1G065690.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, plastid
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G238800.1	Wheat	peroxisome	92.16	98.0
TraesCS6B01G267600.1	Wheat	peroxisome	91.85	97.67
TraesCS6A01G257500.1	Wheat	peroxisome	91.54	97.33
Os02t0678400-01	Rice	plasma membrane	85.89	88.1
EES07456	Sorghum	cytosol, peroxisome, plastid	84.33	87.62
Zm00001d017601_P001	Maize	extracellular, peroxisome	83.7	86.97
VIT_02s0025g04610.t01	Wine grape	cytosol	81.19	85.76
GSMUA_Achr5P10430_001	Banana	cytosol	81.82	85.29
GSMUA_Achr1P03840_001	Banana	cytosol	81.5	84.97
Bra027005.1-P	Field mustard	cytosol	77.12	82.83
CDY45969	Canola	cytosol	77.12	82.83
PGSC0003DMT400058533	Potato	cytosol	78.06	82.72
CDY45471	Canola	cytosol	76.8	82.49
AT1G63000.1	Thale cress	cytosol	77.43	82.06
Solyc08g080140.2.1	Tomato	extracellular	76.18	80.73
KRH77471	Soybean	cytosol, endoplasmic reticulum	68.65	78.78
Bra019776.1-P	Field mustard	cytosol	78.37	77.88
CDY57072	Canola	cytosol, extracellular, peroxisome	78.68	77.71
CDX98052	Canola	cytosol	75.86	74.92
HORVU4Hr1G059120.2	Barley	plastid	74.61	32.92
HORVU5Hr1G007050.2	Barley	plastid	73.04	32.14
HORVU7Hr1G053260.2	Barley	plastid	5.33	3.47
HORVU7Hr1G031270.1	Barley	endoplasmic reticulum	4.39	3.16
HORVU5Hr1G075660.1	Barley	plastid	5.02	3.15
HORVU5Hr1G060660.3	Barley	mitochondrion	3.76	3.05
HORVU5Hr1G055920.8	Barley	plastid	3.45	2.94
HORVU7Hr1G074300.2	Barley	golgi	3.45	2.72
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	3.45	2.67
HORVU5Hr1G077110.3	Barley	mitochondrion	3.45	2.61
HORVU5Hr1G080860.10	Barley	mitochondrion	3.13	2.36
HORVU4Hr1G063010.1	Barley	peroxisome	3.45	2.14
HORVU1Hr1G095430.8	Barley	cytosol, nucleus	2.19	1.86

Protein Annotations

EnsemblPlants:HORVU6Hr1G065690.1	EnsemblPlantsGene:HORVU6Hr1G065690	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:RmlD-like-bd	PANTHER:PTHR10366
PANTHER:PTHR10366:SF405	PFAM:PF04321	SUPFAM:SSF51735	UniParc:UPI000B46B928	UniProt:A0A287UH27	MapMan:3.13.6.1

Description

No Description!

Coordinates

chrchr6H:+:452511333..452515063

Molecular Weight (calculated)

35531.7 Da

IEP (calculated)

8.125

GRAVY (calculated)

-0.205

Length

319 amino acids

Sequence
(BLAST)

001: LSSSVDGLAH AHARRMHKPI RITVNGSSPP ALKFLIYGRT GWIGGLLGKL CTAQGIPFAY GAGRLENRAQ LEADIDEVAP THVFNAAGVT GRPNVDWCET
101: HRVETIRANV CGTLTLADVC RARGLVLINY ATGCIFEYDA AHPLGSGVGF KEEDTPNFVG SFYSKTKAMV EELLKNYENV CTLRVRMPIS SDLSNPRNFI
201: TKITRYDKVV DIPNSMTILD ELLPISIEMA KRNLTGIWNF TNPGVVSHNE ILEMYRDYID PNFSWKNFNL EEQAKVIVAP RSNNELDTVK LKTEFPELLS
301: IKESLIKNVF KPNQKTSKA

Best Arabidopsis Sequence Match ( AT1G63000.1 )
(BLAST)

001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A

Arabidopsis Description

NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.