Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019776.1-P | Field mustard | cytosol | 95.67 | 96.26 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 90.71 | 90.71 |
| CDY45471 | Canola | cytosol | 82.04 | 89.23 |
| CDY45969 | Canola | cytosol | 81.73 | 88.89 |
| AT1G63000.1 | Thale cress | cytosol | 81.11 | 87.04 |
| VIT_02s0025g04610.t01 | Wine grape | cytosol | 77.4 | 82.78 |
| KRH77471 | Soybean | cytosol, endoplasmic reticulum | 71.21 | 82.73 |
| PGSC0003DMT400058533 | Potato | cytosol | 75.85 | 81.4 |
| TraesCS6D01G238800.1 | Wheat | peroxisome | 75.23 | 81.0 |
| TraesCS6A01G257500.1 | Wheat | peroxisome | 74.92 | 80.67 |
| TraesCS6B01G267600.1 | Wheat | peroxisome | 74.61 | 80.33 |
| Solyc08g080140.2.1 | Tomato | extracellular | 73.68 | 79.07 |
| EES07456 | Sorghum | cytosol, peroxisome, plastid | 74.92 | 78.83 |
| GSMUA_Achr1P03840_001 | Banana | cytosol | 73.06 | 77.12 |
| Zm00001d017601_P001 | Maize | extracellular, peroxisome | 72.76 | 76.55 |
| GSMUA_Achr5P10430_001 | Banana | cytosol | 72.45 | 76.47 |
| Os02t0678400-01 | Rice | plasma membrane | 73.06 | 75.88 |
| HORVU6Hr1G065690.1 | Barley | peroxisome, plastid | 74.92 | 75.86 |
| CDY72469 | Canola | cytosol | 26.01 | 63.64 |
| CDY71423 | Canola | cytosol, nucleus | 70.9 | 53.13 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 71.52 | 35.93 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 71.52 | 35.76 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 71.52 | 35.76 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 70.9 | 35.56 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 72.76 | 35.34 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 73.06 | 35.22 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 72.45 | 35.19 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 72.45 | 35.03 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 72.45 | 34.93 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 73.37 | 33.52 |
| CDX81794 | Canola | plastid | 34.98 | 32.56 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 13.93 | 10.51 |
| CDY71965 | Canola | cytosol, mitochondrion | 4.02 | 5.46 |
| CDX78998 | Canola | mitochondrion | 5.26 | 4.14 |
| CDY49495 | Canola | cytosol | 1.24 | 4.08 |
| CDX82768 | Canola | mitochondrion | 4.95 | 3.89 |
| CDY49498 | Canola | golgi | 4.95 | 3.88 |
| CDY49015 | Canola | golgi | 4.95 | 3.88 |
| CDY47846 | Canola | golgi | 4.02 | 3.79 |
| CDX77481 | Canola | endoplasmic reticulum | 5.26 | 3.75 |
| CDY53207 | Canola | endoplasmic reticulum | 5.26 | 3.74 |
| CDY50431 | Canola | cytosol | 4.02 | 3.74 |
| CDX92990 | Canola | endoplasmic reticulum | 5.26 | 3.73 |
| CDX85133 | Canola | endoplasmic reticulum | 5.26 | 3.73 |
| CDY49193 | Canola | cytosol | 4.02 | 3.7 |
| CDY47346 | Canola | cytosol | 4.02 | 3.7 |
| CDY13102 | Canola | golgi | 4.64 | 3.64 |
| CDY64583 | Canola | endoplasmic reticulum | 4.95 | 3.48 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 4.95 | 3.48 |
| CDY08378 | Canola | golgi | 3.72 | 3.48 |
| CDY40862 | Canola | cytosol, golgi | 3.72 | 3.46 |
| CDX86828 | Canola | golgi | 3.72 | 3.46 |
| CDY03506 | Canola | cytosol, golgi | 3.72 | 3.45 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.64 | 3.45 |
| CDY47611 | Canola | golgi | 3.72 | 3.45 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.64 | 3.45 |
| CDY31278 | Canola | cytosol | 3.72 | 3.42 |
| CDY21065 | Canola | cytosol | 3.72 | 3.42 |
| CDY29113 | Canola | golgi | 4.33 | 3.4 |
| CDY02312 | Canola | mitochondrion | 4.33 | 3.33 |
| CDY09555 | Canola | mitochondrion | 4.33 | 3.33 |
| CDY52524 | Canola | golgi | 4.33 | 3.3 |
| CDY69000 | Canola | cytosol | 3.41 | 3.28 |
| CDY31644 | Canola | golgi | 4.02 | 3.07 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 4.02 | 3.03 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 4.02 | 3.03 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.02 | 3.02 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.02 | 3.02 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 4.02 | 3.02 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 4.02 | 3.0 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 4.02 | 2.99 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 3.72 | 2.8 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 3.72 | 2.8 |
| CDY60264 | Canola | plastid | 4.02 | 2.13 |
Protein Annotations
| EnsemblPlants:CDX98052 | EnsemblPlantsGene:GSBRNA2T00105426001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:RmlD-like-bd | PANTHER:PTHR10366 |
| PANTHER:PTHR10366:SF405 | PFAM:PF04321 | ProteinID:CDX98052 | ProteinID:CDX98052.1 | SUPFAM:SSF51735 | UniParc:UPI0004EE34A3 |
| MapMan:3.13.6.1 | : | : | : | : | : |
Description
BnaA06g08030D
Coordinates
chrLK031902:-:742524..743861
Molecular Weight (calculated)
36140.1 Da
IEP (calculated)
5.126
GRAVY (calculated)
-0.274
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDPTVSSYY SPVKSTITTE RMGAEANGAS SSLNFLIYGR TGWIGGILGK LCEAQGISYT YGSGRLEDRR SLVADLDSVK PSHVFNAAGV TGRPNVDWCE
101: SHKVETIRTN VVGTLTLADV CRERGLVLIN YATGCIFEYD SGHPLGSGLG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLPSPLIS SDLSNPRNFI
201: TKITRYEKVV DIPNSMTILD ELLPISLEMA KRNLTGIWNF TNPGVVSHNE ILEMYREFVD PSFTWKNFTL EEQAKVIVAP RSNNELDATK LKTEFPEMLS
301: IKEALVKFVF EPNKDRDQRL IMD
101: SHKVETIRTN VVGTLTLADV CRERGLVLIN YATGCIFEYD SGHPLGSGLG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLPSPLIS SDLSNPRNFI
201: TKITRYEKVV DIPNSMTILD ELLPISLEMA KRNLTGIWNF TNPGVVSHNE ILEMYREFVD PSFTWKNFTL EEQAKVIVAP RSNNELDATK LKTEFPEMLS
301: IKEALVKFVF EPNKDRDQRL IMD
001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
Arabidopsis Description
NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.