Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45471 | Canola | cytosol | 69.7 | 30.98 |
| CDY45969 | Canola | cytosol | 68.94 | 30.64 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 67.42 | 27.55 |
| CDX98052 | Canola | cytosol | 63.64 | 26.01 |
| CDY71423 | Canola | cytosol, nucleus | 61.36 | 18.79 |
| CDX81794 | Canola | plastid | 49.24 | 18.73 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 60.61 | 12.44 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 62.88 | 12.39 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 60.61 | 12.38 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 60.61 | 12.38 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 59.85 | 12.27 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 62.12 | 12.24 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 61.36 | 12.18 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 61.36 | 12.18 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 60.61 | 11.98 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 62.88 | 11.74 |
| CDY49495 | Canola | cytosol | 3.03 | 4.08 |
| CDY71965 | Canola | cytosol, mitochondrion | 4.55 | 2.52 |
| CDX77481 | Canola | endoplasmic reticulum | 7.58 | 2.21 |
| CDX85133 | Canola | endoplasmic reticulum | 7.58 | 2.19 |
| CDY69000 | Canola | cytosol | 5.3 | 2.09 |
| CDY47846 | Canola | golgi | 5.3 | 2.04 |
| CDY08378 | Canola | golgi | 5.3 | 2.03 |
| CDY49193 | Canola | cytosol | 5.3 | 1.99 |
| CDY47346 | Canola | cytosol | 5.3 | 1.99 |
| CDY53207 | Canola | endoplasmic reticulum | 6.82 | 1.98 |
| CDX92990 | Canola | endoplasmic reticulum | 6.82 | 1.97 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 6.06 | 1.86 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 6.06 | 1.86 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 6.06 | 1.84 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 6.06 | 1.84 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 6.06 | 1.84 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 6.06 | 1.84 |
| CDY64583 | Canola | endoplasmic reticulum | 6.06 | 1.74 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 6.06 | 1.74 |
| CDY40862 | Canola | cytosol, golgi | 4.55 | 1.73 |
| CDX86828 | Canola | golgi | 4.55 | 1.73 |
| CDY50431 | Canola | cytosol | 4.55 | 1.72 |
| CDY21065 | Canola | cytosol | 4.55 | 1.71 |
| CDY31278 | Canola | cytosol | 4.55 | 1.71 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.3 | 1.63 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.3 | 1.63 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.3 | 1.63 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.3 | 1.63 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 5.3 | 1.63 |
| CDX78998 | Canola | mitochondrion | 4.55 | 1.46 |
| CDY47611 | Canola | golgi | 3.79 | 1.44 |
| CDY03506 | Canola | cytosol, golgi | 3.79 | 1.44 |
| CDX82768 | Canola | mitochondrion | 3.79 | 1.22 |
| CDY49015 | Canola | golgi | 3.79 | 1.21 |
| CDY49498 | Canola | golgi | 3.79 | 1.21 |
| CDY02312 | Canola | mitochondrion | 3.79 | 1.19 |
| CDY09555 | Canola | mitochondrion | 3.79 | 1.19 |
| CDY52524 | Canola | golgi | 3.79 | 1.18 |
| CDY31644 | Canola | golgi | 3.79 | 1.18 |
| CDY60264 | Canola | plastid | 5.3 | 1.15 |
| CDY29113 | Canola | golgi | 3.03 | 0.97 |
| CDY13102 | Canola | golgi | 3.03 | 0.97 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 2.27 | 0.7 |
Protein Annotations
| EnsemblPlants:CDY72469 | EnsemblPlantsGene:GSBRNA2T00029927001 | Gene3D:3.40.50.720 | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF405 | ProteinID:CDY72469 |
| ProteinID:CDY72469.1 | UniParc:UPI0004EB114C | UniProt:A0A078K0K9 | MapMan:3.13.6.1 | : | : |
Description
BnaCnng77810DBnaCnng77810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K0K9]
Coordinates
chrLK051219:-:1100..1498
Molecular Weight (calculated)
15115.4 Da
IEP (calculated)
6.536
GRAVY (calculated)
-0.367
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHVHSEGEC PSLLINQTQE TSSPRLLGMR KLLTSQTRVT ILDELLPLSI EIAKRNLIGI YNFTNPDVVS PNEILEMYRE YNEEQAKVIV SPRSNNDLDA
101: AKLKTEFPKM LSIQESLIKF VFEPNKKTEV KV
101: AKLKTEFPKM LSIQESLIKF VFEPNKKTEV KV
001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
Arabidopsis Description
NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.