Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 99.54 | 99.54 |
| Bra000385.1-P | Field mustard | cytosol, endoplasmic reticulum, golgi, plastid | 99.31 | 99.31 |
| AT2G45310.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 93.1 | 92.68 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 83.45 | 84.42 |
| VIT_15s0048g00340.t01 | Wine grape | endoplasmic reticulum, plastid | 83.68 | 84.06 |
| VIT_15s0048g00330.t01 | Wine grape | plastid | 82.3 | 83.84 |
| VIT_15s0048g00320.t01 | Wine grape | cytosol, endoplasmic reticulum, golgi, mitochondrion | 82.3 | 76.99 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 72.18 | 73.19 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 71.72 | 72.73 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 72.18 | 72.18 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 71.95 | 72.12 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 67.36 | 68.14 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 67.13 | 68.07 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 67.13 | 68.07 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 67.13 | 67.91 |
| CDX77481 | Canola | endoplasmic reticulum | 68.28 | 65.56 |
| CDX85133 | Canola | endoplasmic reticulum | 68.28 | 65.13 |
| CDX92990 | Canola | endoplasmic reticulum | 67.59 | 64.47 |
| CDY53207 | Canola | endoplasmic reticulum | 67.36 | 64.4 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 67.13 | 63.48 |
| CDY64583 | Canola | endoplasmic reticulum | 66.9 | 63.26 |
| CDY31278 | Canola | cytosol | 20.92 | 25.93 |
| CDY21065 | Canola | cytosol | 20.92 | 25.93 |
| CDY47611 | Canola | golgi | 20.69 | 25.86 |
| CDY69000 | Canola | cytosol | 19.77 | 25.67 |
| CDY49193 | Canola | cytosol | 20.69 | 25.64 |
| CDY47346 | Canola | cytosol | 20.69 | 25.64 |
| CDY03506 | Canola | cytosol, golgi | 20.46 | 25.57 |
| CDY47846 | Canola | golgi | 19.77 | 25.07 |
| CDX86828 | Canola | golgi | 20.0 | 25.07 |
| CDY40862 | Canola | cytosol, golgi | 20.0 | 25.07 |
| CDY08378 | Canola | golgi | 19.54 | 24.64 |
| CDY50431 | Canola | cytosol | 19.31 | 24.14 |
| CDY49498 | Canola | golgi | 20.46 | 21.6 |
| CDY49015 | Canola | golgi | 20.23 | 21.36 |
| CDY09555 | Canola | mitochondrion | 20.46 | 21.19 |
| CDY02312 | Canola | mitochondrion | 20.46 | 21.19 |
| CDX78998 | Canola | mitochondrion | 20.0 | 21.17 |
| CDX82768 | Canola | mitochondrion | 20.0 | 21.17 |
| CDY31644 | Canola | golgi | 20.46 | 20.99 |
| CDY52524 | Canola | golgi | 20.23 | 20.75 |
| CDY13102 | Canola | golgi | 19.54 | 20.63 |
| CDY29113 | Canola | golgi | 19.31 | 20.39 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 19.08 | 19.39 |
| CDY71965 | Canola | cytosol, mitochondrion | 10.34 | 18.91 |
| CDY60264 | Canola | plastid | 21.38 | 15.22 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 21.38 | 13.88 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 21.38 | 13.88 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 20.92 | 13.68 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 20.92 | 13.68 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 20.92 | 13.62 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 19.77 | 13.37 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 19.54 | 13.2 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 19.54 | 13.16 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 19.54 | 13.16 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 21.38 | 13.15 |
| CDY49495 | Canola | cytosol | 2.76 | 12.24 |
| CDX81794 | Canola | plastid | 6.44 | 8.07 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.6 | 6.19 |
| CDY72469 | Canola | cytosol | 1.84 | 6.06 |
| CDY71423 | Canola | cytosol, nucleus | 5.52 | 5.57 |
| CDY45969 | Canola | cytosol | 3.45 | 5.05 |
| CDY45471 | Canola | cytosol | 3.45 | 5.05 |
| CDX98052 | Canola | cytosol | 3.45 | 4.64 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078E2W8 | EnsemblPlants:CDX95646 | ProteinID:CDX95646 |
| ProteinID:CDX95646.1 | InterPro:Epimerase_deHydtase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016857 | GO:GO:0050662 | EnsemblPlantsGene:GSBRNA2T00101528001 | InterPro:NAD(P)-bd_dom_sf |
| InterPro:Nuc_sugar_epim | PFAM:PF01370 | PRINTS:PR01713 | PANTHER:PTHR43574 | PANTHER:PTHR43574:SF22 | SUPFAM:SSF51735 |
| TMHMM:TMhelix | UniParc:UPI0004EC8E17 | SEG:seg | : | : | : |
Description
BnaC03g25270D
Coordinates
chrLK031890:+:439585..440892
Molecular Weight (calculated)
48104.8 Da
IEP (calculated)
10.482
GRAVY (calculated)
-0.219
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRLDDIPSS PGKFKIDKSS YFNRLRFQSS PIKFAFISFF LLCLISLLFL RSPPSVNSSQ SDPSRRSLRT FTYGGPAWEK RIRASARTRT SSNGMTVLVT
101: GAAGFVGTHV SSALKRRGDG VIGLDNFNDY YDPSLKRARQ ALLERSGVFI VEGDINDVEL LRKLFKIVTF THVMHLAAQA GVRYAMENPS SYVHSNIAGL
201: VNLLEVCKAA NPQPAIVWAS SSSVYGLNTK VPFSEKDRTD QPASLYAATK KAGEEIAHTY NHIYGLSLTG LRFFTVYGPW GRPDMAYFFF TKDILKGKSI
301: SIFESANHGT VARDFTYIDD IVKGCLGALD TAEKSTGTGG KKRGPAQLRV FNLGNTSPVP VSDLVSILER QLKVKAKRNV IKMPRNGDVP FTHANISLAQ
401: RELGYKPTTD LQTGLKKFVR WYLSYYSGGK KAAAR
101: GAAGFVGTHV SSALKRRGDG VIGLDNFNDY YDPSLKRARQ ALLERSGVFI VEGDINDVEL LRKLFKIVTF THVMHLAAQA GVRYAMENPS SYVHSNIAGL
201: VNLLEVCKAA NPQPAIVWAS SSSVYGLNTK VPFSEKDRTD QPASLYAATK KAGEEIAHTY NHIYGLSLTG LRFFTVYGPW GRPDMAYFFF TKDILKGKSI
301: SIFESANHGT VARDFTYIDD IVKGCLGALD TAEKSTGTGG KKRGPAQLRV FNLGNTSPVP VSDLVSILER QLKVKAKRNV IKMPRNGDVP FTHANISLAQ
401: RELGYKPTTD LQTGLKKFVR WYLSYYSGGK KAAAR
001: MSRLDDIPSS PGKFKMEKSS YLHRLRFQSS LTKFAFFSFF LLCLISLLFL RSPPSINPSS PSDPSRRSLR TNTYGGPAWE KRLRSSARIR TSTNNGITVL
101: VTGAAGFVGT HVSAALKRRG DGVIGLDNFN DYYDPSLKRA RRALLERSGI FIVEGDINDV ELLRKLFKIV SFTHVMHLAA QAGVRYAMEN PSSYVHSNIA
201: GFVNLLEICK SVNPQPAIVW ASSSSVYGLN TKVPFSEKDK TDQPASLYAA TKKAGEEIAH TYNHIYGLSL TGLRFFTVYG PWGRPDMAYF FFTKDILKGK
301: SISIFESANH GTVARDFTYI DDIVKGCLAA LDTAEKSTGS GGKKRGPAQL RVFNLGNTSP VPVSDLVRIL ERQLKVKAKK NLIKMPRNGD VPFTHANISL
401: AQRELGYKPT TDLQTGLKKF VRWYLSYYSG DKKAAAR
101: VTGAAGFVGT HVSAALKRRG DGVIGLDNFN DYYDPSLKRA RRALLERSGI FIVEGDINDV ELLRKLFKIV SFTHVMHLAA QAGVRYAMEN PSSYVHSNIA
201: GFVNLLEICK SVNPQPAIVW ASSSSVYGLN TKVPFSEKDK TDQPASLYAA TKKAGEEIAH TYNHIYGLSL TGLRFFTVYG PWGRPDMAYF FFTKDILKGK
301: SISIFESANH GTVARDFTYI DDIVKGCLAA LDTAEKSTGS GGKKRGPAQL RVFNLGNTSP VPVSDLVRIL ERQLKVKAKK NLIKMPRNGD VPFTHANISL
401: AQRELGYKPT TDLQTGLKKF VRWYLSYYSG DKKAAAR
Arabidopsis Description
GAE4UDP-glucuronate 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:O22141]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.