Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 2
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:golgi, plastid
BaCelLo:plastid
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033746.1-P Field mustard golgi 98.54 98.54
CDY49015 Canola golgi 98.3 98.3
CDY29113 Canola golgi 92.96 92.96
CDY13102 Canola golgi 92.23 92.23
CDY71965 Canola cytosol, mitochondrion 51.46 89.08
AT5G44480.1 Thale cress mitochondrion 91.5 86.47
CDX82768 Canola mitochondrion 84.71 84.91
CDX78998 Canola mitochondrion 84.71 84.91
Os04t0618200-02 Rice golgi 74.03 78.01
KRH43065 Soybean golgi, mitochondrion, plastid 77.91 77.16
PGSC0003DMT400080637 Potato golgi 74.76 77.0
CDY09555 Canola mitochondrion 78.16 76.67
CDY02312 Canola mitochondrion 78.16 76.67
KRH59194 Soybean golgi, mitochondrion 76.94 76.2
KRH36892 Soybean golgi, mitochondrion 76.7 76.14
KRH11871 Soybean golgi, plastid 76.21 75.66
Solyc02g069580.2.1 Tomato golgi, mitochondrion 76.46 75.54
GSMUA_Achr11P... Banana cytosol, golgi 71.6 75.45
EER95001 Sorghum mitochondrion 74.27 75.18
Os08t0129700-01 Rice mitochondrion 74.03 75.12
PGSC0003DMT400054459 Potato mitochondrion 75.97 75.06
GSMUA_Achr3P23390_001 Banana mitochondrion 75.97 75.06
Solyc02g030230.2.1 Tomato mitochondrion 75.73 75.0
CDY52524 Canola golgi 76.94 74.76
GSMUA_Achr11P... Banana mitochondrion 75.24 74.34
GSMUA_Achr8P33320_001 Banana mitochondrion 75.24 74.34
CDY31644 Canola golgi 76.46 74.29
TraesCS7D01G307500.1 Wheat golgi, mitochondrion 72.57 73.83
KXG27129 Sorghum mitochondrion, plastid 74.27 73.73
HORVU7Hr1G074300.2 Barley golgi 72.33 73.58
TraesCS2A01G460400.1 Wheat unclear 73.3 73.3
TraesCS7A01G311100.1 Wheat golgi 71.84 73.09
TraesCS2B01G482000.1 Wheat golgi 73.06 73.06
HORVU2Hr1G104110.1 Barley mitochondrion, plastid 73.06 73.06
TraesCS2D01G460600.1 Wheat mitochondrion, plastid 72.82 72.82
TraesCS7B01G210700.2 Wheat golgi 72.57 72.4
TraesCS5D01G298700.1 Wheat mitochondrion 73.79 72.21
TraesCS5A01G291300.1 Wheat golgi 73.79 72.21
GSMUA_Achr4P31860_001 Banana mitochondrion 72.82 72.12
TraesCS5B01G290300.1 Wheat mitochondrion 73.54 71.97
HORVU5Hr1G077110.3 Barley mitochondrion 73.54 71.97
Os07t0139400-01 Rice plasma membrane 73.54 71.97
EER95854 Sorghum mitochondrion, plastid 73.3 70.23
CDY47611 Canola golgi 36.16 42.82
CDY03506 Canola cytosol, golgi 35.92 42.53
CDX86828 Canola golgi 35.19 41.79
CDY47846 Canola golgi 34.71 41.69
CDY40862 Canola cytosol, golgi 34.95 41.5
CDY08378 Canola golgi 34.71 41.45
CDY50431 Canola cytosol 34.95 41.38
CDY69000 Canola cytosol 31.8 39.1
CDY31278 Canola cytosol 33.01 38.75
CDY21065 Canola cytosol 33.01 38.75
CDY47346 Canola cytosol 32.28 37.89
CDY49193 Canola cytosol 32.28 37.89
Zm00001d010657_P001 Maize golgi, plastid, vacuole 31.31 37.28
Zm00001d017999_P002 Maize mitochondrion 27.91 36.98
CDY49495 Canola cytosol 6.55 27.55
CDY60264 Canola plastid 34.47 23.24
CDX97356 Canola cytosol, endoplasmic reticulum, golgi 23.54 22.61
CDY04398 Canola cytosol, endoplasmic reticulum, golgi 22.82 21.91
CDY63064 Canola cytosol, endoplasmic reticulum, golgi, plastid 22.82 21.86
CDX94504 Canola cytosol, endoplasmic reticulum, peroxisome 23.06 21.84
CDX86716 Canola cytosol, endoplasmic reticulum, peroxisome 22.82 21.66
CDX72242 Canola cytosol, endoplasmic reticulum, golgi, plastid 22.09 21.16
CDY39205 Canola cytosol, endoplasmic reticulum, golgi, plastid 22.09 21.16
CDY28188 Canola cytosol, endoplasmic reticulum, golgi, plastid 21.6 20.75
CDY70926 Canola cytosol, endoplasmic reticulum, golgi, plastid 21.6 20.75
CDY67756 Canola cytosol, endoplasmic reticulum, golgi, plastid 21.6 20.46
CDX95646 Canola cytosol, endoplasmic reticulum, golgi, plastid 21.6 20.46
CDX77481 Canola endoplasmic reticulum 22.33 20.31
CDY64583 Canola endoplasmic reticulum 22.57 20.22
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 22.57 20.22
CDX85133 Canola endoplasmic reticulum 22.33 20.18
CDX92990 Canola endoplasmic reticulum 22.33 20.18
CDY53207 Canola endoplasmic reticulum 22.09 20.0
CDY25850 Canola cytosol, mitochondrion, peroxisome 18.93 18.22
CDY45116 Canola cytosol, mitochondrion, peroxisome 20.63 12.78
CDY24092 Canola cytosol, mitochondrion, peroxisome 20.63 12.78
CDY60210 Canola cytosol, mitochondrion, peroxisome 20.63 12.72
CDY35137 Canola cytosol, mitochondrion, plastid 20.63 12.69
CDY40003 Canola cytosol, mitochondrion, plastid 20.63 12.69
CDX88455 Canola cytosol, peroxisome, plastid 21.36 12.45
CDX97601 Canola cytosol, mitochondrion, plastid 19.17 12.23
CDX98494 Canola cytosol, mitochondrion, plastid 19.17 12.23
CDY20084 Canola cytosol, mitochondrion, peroxisome 18.93 12.11
CDY32340 Canola cytosol, mitochondrion, peroxisome 18.69 11.98
CDX81794 Canola plastid 6.31 7.49
CDY71423 Canola cytosol, nucleus 6.07 5.8
CDX98052 Canola cytosol 3.88 4.95
CDY57072 Canola cytosol, extracellular, peroxisome 3.16 4.02
CDY72469 Canola cytosol 1.21 3.79
CDY45969 Canola cytosol 2.67 3.7
CDY45471 Canola cytosol 2.67 3.7
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.7.1Gene3D:3.40.50.720Gene3D:3.90.25.10GO:A0A078IKC4
UniProt:A0A078IKC4EnsemblPlants:CDY49498ProteinID:CDY49498ProteinID:CDY49498.1GO:GO:0003674GO:GO:0003824
GO:GO:0003978GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152GO:GO:0016853
EnsemblPlantsGene:GSBRNA2T00093165001InterPro:NAD(P)-bd_domInterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43349PANTHER:PTHR43349:SF14
MetaCyc:PWY-3821MetaCyc:PWY-6317MetaCyc:PWY-6397MetaCyc:PWY-6527MetaCyc:PWY-7328MetaCyc:PWY-7344
SUPFAM:SSF51735TIGRFAMs:TIGR01179TMHMM:TMhelixInterPro:UDP_G4EUniPathway:UPA00214UniParc:UPI0004EBF356
SEG:seg:::::
Description
BnaC07g18010DBnaC07g18010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKC4]
Coordinates
chrLK032836:-:108159..111224
Molecular Weight (calculated)
45478.9 Da
IEP (calculated)
9.616
GRAVY (calculated)
-0.230
Length
412 amino acids
Sequence
(BLAST)
001: MTSLSGVRSQ RKNSKPLSPG DMDYIESKTK SNLMGKLLLL ASLIILAFIV INKASSFTSP SVFSRREEGV THVLVTGGAG YIGSHAALRL LKDKYRVTIV
101: DNLSRGNLGA VKVLQRLFPQ TGRLQFIYAD LGDPAAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKLKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELRDQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPHKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDL LPRRPGDYAE VYSDPTKILR DLNWTARFTN LQDSLQVAWR
401: WQKIHPHGYA SS
Best Arabidopsis Sequence Match ( AT5G44480.3 )
(BLAST)
001: MLNSSGVRTQ RRSPRPLSLG EMDCLEPKTK NNLTGKLLLV ASLLILAIIV ISQSSSFTSP SAFSQREEGV THVLVTGGAG YIGSHAALRL LRDSYRVTIV
101: DNLSRGNLGA VKTLQQLFPQ TGRLQFIYAD LGDPLAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTARFTN LQDSLQVAWR
401: WQKIHPHGYN SY
Arabidopsis Description
DURPutative UDP-arabinose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI17]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.