Factsheet for Solyc02g030230.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 6
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400080637	Potato	golgi	91.83	95.5
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	88.94	88.73
KRH11871	Soybean	golgi, plastid	81.25	81.45
KRH36892	Soybean	golgi, mitochondrion	81.01	81.2
Solyc07g043550.2.1	Tomato	cytosol, unclear	58.89	81.13
Os04t0618200-02	Rice	golgi	75.72	80.56
CDY71965	Canola	cytosol, mitochondrion	45.67	79.83
KRH59194	Soybean	golgi, mitochondrion	79.81	79.81
GSMUA_Achr11P...	Banana	mitochondrion	79.81	79.62
KRH43065	Soybean	golgi, mitochondrion, plastid	79.33	79.33
AT4G20460.1	Thale cress	golgi, mitochondrion	78.37	79.32
CDX82768	Canola	mitochondrion	78.37	79.32
CDX78998	Canola	mitochondrion	78.12	79.08
GSMUA_Achr3P23390_001	Banana	mitochondrion	79.09	78.9
GSMUA_Achr11P...	Banana	cytosol, golgi	73.8	78.52
Os08t0129700-01	Rice	mitochondrion	76.44	78.33
HORVU7Hr1G074300.2	Barley	golgi	75.96	78.02
CDY29113	Canola	golgi	77.16	77.91
Bra027557.1-P	Field mustard	golgi	77.16	77.91
CDY13102	Canola	golgi	76.92	77.67
EER95001	Sorghum	mitochondrion	75.96	77.64
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	76.68	77.43
KXG27129	Sorghum	mitochondrion, plastid	77.16	77.35
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	75.24	77.28
GSMUA_Achr8P33320_001	Banana	mitochondrion	77.4	77.22
TraesCS2B01G482000.1	Wheat	golgi	76.2	76.94
Bra020917.1-P	Field mustard	golgi, mitochondrion	75.96	76.89
TraesCS7A01G311100.1	Wheat	golgi	74.76	76.79
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	75.96	76.7
TraesCS2A01G460400.1	Wheat	unclear	75.96	76.7
Solyc12g006410.1.1	Tomato	unclear	73.56	76.69
Bra033746.1-P	Field mustard	golgi	75.72	76.46
CDY49015	Canola	golgi	75.48	76.21
TraesCS7B01G210700.2	Wheat	golgi	75.24	75.79
CDY49498	Canola	golgi	75.0	75.73
GSMUA_Achr4P31860_001	Banana	mitochondrion	75.24	75.24
TraesCS5A01G291300.1	Wheat	golgi	75.96	75.06
Os07t0139400-01	Rice	plasma membrane	75.72	74.82
HORVU5Hr1G077110.3	Barley	mitochondrion	75.72	74.82
TraesCS5D01G298700.1	Wheat	mitochondrion	75.72	74.82
TraesCS5B01G290300.1	Wheat	mitochondrion	75.72	74.82
AT5G44480.1	Thale cress	mitochondrion	77.88	74.31
EER95854	Sorghum	mitochondrion, plastid	75.0	72.56
Bra013466.1-P	Field mustard	mitochondrion	76.92	69.11
Solyc12g055930.1.1	Tomato	cytosol, extracellular, golgi	37.02	44.25
Solyc08g082440.2.1	Tomato	cytosol, golgi	34.86	41.31
Zm00001d017999_P002	Maize	mitochondrion	29.57	39.55
Solyc08g080570.2.1	Tomato	cytosol	31.97	37.89
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	31.01	37.28
Solyc08g079440.1.1	Tomato	nucleus	23.32	21.8
Solyc12g010540.1.1	Tomato	endoplasmic reticulum	22.36	21.53
Solyc05g053790.1.1	Tomato	cytosol, endoplasmic reticulum, golgi	22.12	21.25
Solyc07g006220.1.1	Tomato	nucleus	21.63	21.18
Solyc03g083550.1.1	Tomato	golgi	20.43	20.94
Solyc05g050990.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion	21.88	20.92
Solyc09g092330.1.1	Tomato	nucleus	22.6	20.8
Solyc10g018260.1.1	Tomato	endoplasmic reticulum, golgi, mitochondrion, plastid	20.91	20.0
Solyc01g091200.2.1	Tomato	nucleus	20.91	20.0
Solyc08g069110.2.1	Tomato	unclear	21.39	13.67
Solyc07g062130.2.1	Tomato	extracellular, unclear	20.43	12.61
Solyc10g007480.2.1	Tomato	nucleus	14.66	10.34
Solyc08g080140.2.1	Tomato	extracellular	3.12	4.32

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0003978	GO:GO:0005575	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	UniProt:K4B574	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	EnsemblPlantsGene:Solyc02g030230.2
EnsemblPlants:Solyc02g030230.2.1	TIGRFAMs:TIGR01179	TMHMM:TMhelix	InterPro:UDP_G4E	UniParc:UPI0002768DAE	SEG:seg

Description

No Description!

Coordinates

chr2:-:25325074..25330259

Molecular Weight (calculated)

46038.6 Da

IEP (calculated)

8.971

GRAVY (calculated)

-0.189

Length

416 amino acids

Sequence
(BLAST)

001: MLNLVRTRTQ LRSNRSMPLV GMDYADPKKK NNFVGKILMA AILTALCILM LKHSPDFNPP TAFSHHEPGV THVLVTGGAG YIGSHAALRL LKDSYRVTIV
101: DNLSRGNLGA VMILQELFPE PGRFQFIYAD LGDAKVVHKI FSQNAFDAVM HFAAVAYVGE STLDPLKYYH NITSNTLTVL EAMATRGVPT LIYSSTCATY
201: GEPEEMPITE ETPQLPINPY GKAKKMAEDI ILDFHKNSNM SVMILRYFNV IGSDPNGRLG EAPRPELREH GRISGACFDA ARGIIPGLKV RGTDYKTADG
301: TCIRDYIDVT DLVDAHVKAL EKARPGKVGI YNVGTGRGRS VKEFVEACKV ATGVPIKVEF LPRRPGDYAE VYSDPTKIRN ELNWTAKYTD LQQSLQIAWR
401: WQKSHLNGYS LSVATS

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.