Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027557.1-P | Field mustard | golgi | 98.54 | 98.54 |
| CDY13102 | Canola | golgi | 98.06 | 98.06 |
| CDY49015 | Canola | golgi | 93.93 | 93.93 |
| CDY49498 | Canola | golgi | 92.96 | 92.96 |
| AT5G44480.1 | Thale cress | mitochondrion | 94.17 | 88.99 |
| CDY71965 | Canola | cytosol, mitochondrion | 51.21 | 88.66 |
| CDX82768 | Canola | mitochondrion | 84.71 | 84.91 |
| CDX78998 | Canola | mitochondrion | 84.71 | 84.91 |
| CDY09555 | Canola | mitochondrion | 81.07 | 79.52 |
| CDY02312 | Canola | mitochondrion | 80.83 | 79.29 |
| Os04t0618200-02 | Rice | golgi | 74.51 | 78.52 |
| PGSC0003DMT400080637 | Potato | golgi | 75.97 | 78.25 |
| KRH43065 | Soybean | golgi, mitochondrion, plastid | 78.4 | 77.64 |
| KRH59194 | Soybean | golgi, mitochondrion | 78.4 | 77.64 |
| KRH36892 | Soybean | golgi, mitochondrion | 78.16 | 77.59 |
| KRH11871 | Soybean | golgi, plastid | 77.91 | 77.35 |
| Solyc02g030230.2.1 | Tomato | mitochondrion | 77.91 | 77.16 |
| EER95001 | Sorghum | mitochondrion | 75.97 | 76.9 |
| Solyc02g069580.2.1 | Tomato | golgi, mitochondrion | 77.67 | 76.74 |
| CDY52524 | Canola | golgi | 78.64 | 76.42 |
| Os08t0129700-01 | Rice | mitochondrion | 75.0 | 76.11 |
| PGSC0003DMT400054459 | Potato | mitochondrion | 76.94 | 76.02 |
| GSMUA_Achr11P... | Banana | mitochondrion | 76.94 | 76.02 |
| GSMUA_Achr3P23390_001 | Banana | mitochondrion | 76.94 | 76.02 |
| GSMUA_Achr11P... | Banana | cytosol, golgi | 72.09 | 75.96 |
| CDY31644 | Canola | golgi | 78.16 | 75.94 |
| GSMUA_Achr8P33320_001 | Banana | mitochondrion | 76.7 | 75.78 |
| KXG27129 | Sorghum | mitochondrion, plastid | 75.49 | 74.94 |
| HORVU7Hr1G074300.2 | Barley | golgi | 73.3 | 74.57 |
| TraesCS7D01G307500.1 | Wheat | golgi, mitochondrion | 73.3 | 74.57 |
| TraesCS7A01G311100.1 | Wheat | golgi | 73.06 | 74.32 |
| GSMUA_Achr4P31860_001 | Banana | mitochondrion | 74.76 | 74.04 |
| TraesCS2A01G460400.1 | Wheat | unclear | 74.03 | 74.03 |
| HORVU2Hr1G104110.1 | Barley | mitochondrion, plastid | 74.03 | 74.03 |
| TraesCS2B01G482000.1 | Wheat | golgi | 74.03 | 74.03 |
| Os07t0139400-01 | Rice | plasma membrane | 75.49 | 73.87 |
| TraesCS2D01G460600.1 | Wheat | mitochondrion, plastid | 73.79 | 73.79 |
| TraesCS5D01G298700.1 | Wheat | mitochondrion | 75.0 | 73.4 |
| TraesCS5A01G291300.1 | Wheat | golgi | 75.0 | 73.4 |
| HORVU5Hr1G077110.3 | Barley | mitochondrion | 74.76 | 73.16 |
| TraesCS5B01G290300.1 | Wheat | mitochondrion | 74.76 | 73.16 |
| TraesCS7B01G210700.2 | Wheat | golgi | 73.3 | 73.12 |
| EER95854 | Sorghum | mitochondrion, plastid | 75.49 | 72.33 |
| CDX86828 | Canola | golgi | 35.44 | 42.07 |
| CDY47846 | Canola | golgi | 34.95 | 41.98 |
| CDY47611 | Canola | golgi | 35.44 | 41.95 |
| CDY40862 | Canola | cytosol, golgi | 35.19 | 41.79 |
| CDY08378 | Canola | golgi | 34.95 | 41.74 |
| CDY03506 | Canola | cytosol, golgi | 35.19 | 41.67 |
| CDY50431 | Canola | cytosol | 34.71 | 41.09 |
| CDY69000 | Canola | cytosol | 32.28 | 39.7 |
| CDY31278 | Canola | cytosol | 33.25 | 39.03 |
| CDY21065 | Canola | cytosol | 33.25 | 39.03 |
| Zm00001d017999_P002 | Maize | mitochondrion | 29.37 | 38.91 |
| CDY49193 | Canola | cytosol | 32.52 | 38.18 |
| CDY47346 | Canola | cytosol | 32.52 | 38.18 |
| Zm00001d010657_P001 | Maize | golgi, plastid, vacuole | 31.8 | 37.86 |
| CDY49495 | Canola | cytosol | 6.55 | 27.55 |
| CDY60264 | Canola | plastid | 33.98 | 22.91 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 22.82 | 21.91 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 22.33 | 21.45 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 22.33 | 21.15 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 22.09 | 20.97 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 21.84 | 20.93 |
| CDY64583 | Canola | endoplasmic reticulum | 23.06 | 20.65 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 23.06 | 20.65 |
| CDX92990 | Canola | endoplasmic reticulum | 22.33 | 20.18 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 20.87 | 20.05 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 20.87 | 20.05 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 20.87 | 20.0 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 20.87 | 20.0 |
| CDY53207 | Canola | endoplasmic reticulum | 22.09 | 20.0 |
| CDX77481 | Canola | endoplasmic reticulum | 21.84 | 19.87 |
| CDX85133 | Canola | endoplasmic reticulum | 21.84 | 19.74 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 20.39 | 19.31 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 20.39 | 19.31 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 18.93 | 18.22 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 20.63 | 12.78 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 20.63 | 12.78 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 20.63 | 12.72 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 20.39 | 12.54 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 20.39 | 12.54 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 21.12 | 12.31 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 19.17 | 12.23 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 19.17 | 12.23 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 18.93 | 12.11 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 18.69 | 11.98 |
| CDX81794 | Canola | plastid | 7.04 | 8.36 |
| CDY71423 | Canola | cytosol, nucleus | 5.83 | 5.57 |
| CDX98052 | Canola | cytosol | 3.4 | 4.33 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 3.16 | 4.02 |
| CDY45969 | Canola | cytosol | 2.43 | 3.37 |
| CDY45471 | Canola | cytosol | 2.43 | 3.37 |
| CDY72469 | Canola | cytosol | 0.97 | 3.03 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.7.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078GWZ0 |
| UniProt:A0A078GWZ0 | EnsemblPlants:CDY29113 | ProteinID:CDY29113 | ProteinID:CDY29113.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003978 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0006012 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 | EnsemblPlantsGene:GSBRNA2T00041892001 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF16363 | PANTHER:PTHR43349 | PANTHER:PTHR43349:SF14 | MetaCyc:PWY-3821 | MetaCyc:PWY-6317 | MetaCyc:PWY-6397 |
| MetaCyc:PWY-6527 | MetaCyc:PWY-7328 | MetaCyc:PWY-7344 | SUPFAM:SSF51735 | TIGRFAMs:TIGR01179 | TMHMM:TMhelix |
| InterPro:UDP_G4E | UniPathway:UPA00214 | UniParc:UPI0004EC97C8 | SEG:seg | : | : |
Description
BnaC09g18390DBnaC09g18390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWZ0]
Coordinates
chrLK032230:-:373471..375667
Molecular Weight (calculated)
45484.9 Da
IEP (calculated)
9.592
GRAVY (calculated)
-0.188
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLFGVRNQ RRNSRPLSVG DMDYLEPKTK NNLLGKLLLL ASLVILAIIV ISRSSSFTSP SVFSQREEGV THVLVTGGAG YIGSHAALRL LKDSYRVTIV
101: DNLSRGNLGA VKVLQGLFPQ TGRLQFIYAD LGDPAAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPAKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL QKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTAQYTN LQNSLQVAWR
401: WQKIHPHGYA SY
101: DNLSRGNLGA VKVLQGLFPQ TGRLQFIYAD LGDPAAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPAKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL QKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTAQYTN LQNSLQVAWR
401: WQKIHPHGYA SY
001: MLNSSGVRTQ RRSPRPLSLG EMDCLEPKTK NNLTGKLLLV ASLLILAIIV ISQSSSFTSP SAFSQREEGV THVLVTGGAG YIGSHAALRL LRDSYRVTIV
101: DNLSRGNLGA VKTLQQLFPQ TGRLQFIYAD LGDPLAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTARFTN LQDSLQVAWR
401: WQKIHPHGYN SY
101: DNLSRGNLGA VKTLQQLFPQ TGRLQFIYAD LGDPLAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTARFTN LQDSLQVAWR
401: WQKIHPHGYN SY
Arabidopsis Description
DURPutative UDP-arabinose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI17]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.