Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 1
- mitochondrion 1
- cytosol 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037315.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion, plastid | 99.77 | 99.77 |
| AT4G00110.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 95.58 | 95.58 |
| PGSC0003DMT400066897 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 85.35 | 85.15 |
| Solyc01g091200.2.1 | Tomato | nucleus | 85.81 | 84.83 |
| KRH65316 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 86.28 | 84.7 |
| KRH76209 | Soybean | endoplasmic reticulum, plastid | 86.05 | 84.47 |
| CDX95646 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 84.42 | 83.45 |
| CDY67756 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 84.19 | 83.22 |
| Solyc05g050990.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion | 83.72 | 82.76 |
| PGSC0003DMT400024810 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 83.72 | 82.76 |
| PGSC0003DMT400018060 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 83.72 | 82.76 |
| Solyc10g018260.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 83.49 | 82.53 |
| CDX97356 | Canola | cytosol, endoplasmic reticulum, golgi | 73.95 | 74.13 |
| CDY04398 | Canola | cytosol, endoplasmic reticulum, golgi | 73.95 | 74.13 |
| CDX86716 | Canola | cytosol, endoplasmic reticulum, peroxisome | 73.95 | 73.27 |
| CDX94504 | Canola | cytosol, endoplasmic reticulum, peroxisome | 73.95 | 73.1 |
| CDY70926 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 69.77 | 69.93 |
| CDY28188 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 69.77 | 69.93 |
| CDX72242 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 69.3 | 69.3 |
| CDY39205 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 69.3 | 69.3 |
| CDX77481 | Canola | endoplasmic reticulum | 66.74 | 63.36 |
| CDX85133 | Canola | endoplasmic reticulum | 66.74 | 62.94 |
| CDX92990 | Canola | endoplasmic reticulum | 66.51 | 62.72 |
| CDY53207 | Canola | endoplasmic reticulum | 66.28 | 62.64 |
| CDY18087 | Canola | cytosol, endoplasmic reticulum, golgi | 66.98 | 62.61 |
| CDY64583 | Canola | endoplasmic reticulum | 66.74 | 62.39 |
| CDY47611 | Canola | golgi | 21.63 | 26.72 |
| CDY03506 | Canola | cytosol, golgi | 21.4 | 26.44 |
| CDY21065 | Canola | cytosol | 21.4 | 26.21 |
| CDY31278 | Canola | cytosol | 21.4 | 26.21 |
| CDY47346 | Canola | cytosol | 21.16 | 25.93 |
| CDY49193 | Canola | cytosol | 21.16 | 25.93 |
| CDY69000 | Canola | cytosol | 20.0 | 25.67 |
| CDY40862 | Canola | cytosol, golgi | 20.7 | 25.65 |
| CDX86828 | Canola | golgi | 20.7 | 25.65 |
| CDY47846 | Canola | golgi | 20.0 | 25.07 |
| CDY50431 | Canola | cytosol | 20.23 | 25.0 |
| CDY08378 | Canola | golgi | 19.77 | 24.64 |
| CDY49498 | Canola | golgi | 21.86 | 22.82 |
| CDY49015 | Canola | golgi | 21.63 | 22.57 |
| CDY13102 | Canola | golgi | 21.16 | 22.09 |
| CDY29113 | Canola | golgi | 20.93 | 21.84 |
| CDX78998 | Canola | mitochondrion | 20.47 | 21.41 |
| CDX82768 | Canola | mitochondrion | 20.47 | 21.41 |
| CDY02312 | Canola | mitochondrion | 20.47 | 20.95 |
| CDY09555 | Canola | mitochondrion | 20.47 | 20.95 |
| CDY52524 | Canola | golgi | 20.47 | 20.75 |
| CDY31644 | Canola | golgi | 20.47 | 20.75 |
| CDY25850 | Canola | cytosol, mitochondrion, peroxisome | 19.77 | 19.86 |
| CDY71965 | Canola | cytosol, mitochondrion | 10.7 | 19.33 |
| CDY60264 | Canola | plastid | 21.4 | 15.06 |
| CDY60210 | Canola | cytosol, mitochondrion, peroxisome | 21.4 | 13.77 |
| CDY40003 | Canola | cytosol, mitochondrion, plastid | 21.4 | 13.73 |
| CDY35137 | Canola | cytosol, mitochondrion, plastid | 21.4 | 13.73 |
| CDY24092 | Canola | cytosol, mitochondrion, peroxisome | 21.16 | 13.68 |
| CDY45116 | Canola | cytosol, mitochondrion, peroxisome | 21.16 | 13.68 |
| CDY32340 | Canola | cytosol, mitochondrion, peroxisome | 20.0 | 13.37 |
| CDX98494 | Canola | cytosol, mitochondrion, plastid | 20.0 | 13.31 |
| CDX97601 | Canola | cytosol, mitochondrion, plastid | 20.0 | 13.31 |
| CDY49495 | Canola | cytosol | 3.02 | 13.27 |
| CDY20084 | Canola | cytosol, mitochondrion, peroxisome | 19.77 | 13.2 |
| CDX88455 | Canola | cytosol, peroxisome, plastid | 21.63 | 13.15 |
| CDX81794 | Canola | plastid | 6.74 | 8.36 |
| CDY57072 | Canola | cytosol, extracellular, peroxisome | 4.42 | 5.88 |
| CDY71423 | Canola | cytosol, nucleus | 5.35 | 5.34 |
| CDY72469 | Canola | cytosol | 1.63 | 5.3 |
| CDY45969 | Canola | cytosol | 3.02 | 4.38 |
| CDY45471 | Canola | cytosol | 3.02 | 4.38 |
| CDX98052 | Canola | cytosol | 3.02 | 4.02 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:A0A078JAZ9 | UniProt:A0A078JAZ9 | EnsemblPlants:CDY63064 |
| ProteinID:CDY63064 | ProteinID:CDY63064.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016857 | EnsemblPlantsGene:GSBRNA2T00037891001 |
| InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim | PFAM:PF16363 | PRINTS:PR01713 | PANTHER:PTHR43574 |
| PANTHER:PTHR43574:SF22 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0004EEBA4A | SEG:seg | : |
Description
BnaAnng18570DUDP-glucuronate 4-epimerase 3 [Source:Projected from Arabidopsis thaliana (AT4G00110) UniProtKB/Swiss-Prot;Acc:O81312]
Coordinates
chrLK034239:+:28531..30162
Molecular Weight (calculated)
47616.1 Da
IEP (calculated)
10.494
GRAVY (calculated)
-0.239
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHLDETPST PGKFKMDKSP YFLHRTRWQS SVAKLAFWSL VFVGFIFIFF YRSPSSLPDP SRRSLRTYSW GGPAWEKRVR SSAHVRTRRG VSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISVFQ
301: GANHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIVKMP RNGDVPFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISVFQ
301: GANHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIVKMP RNGDVPFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS
001: MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS
Arabidopsis Description
GAE3GAE3 [Source:UniProtKB/TrEMBL;Acc:A0A178V2K1]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.