Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 2
- golgi 3
- extracellular 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76209 | Soybean | endoplasmic reticulum, plastid | 98.17 | 98.17 |
| AT4G00110.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 85.84 | 87.44 |
| VIT_15s0048g00340.t01 | Wine grape | endoplasmic reticulum, plastid | 85.62 | 86.61 |
| Bra037315.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion, plastid | 84.93 | 86.51 |
| CDY63064 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 84.7 | 86.28 |
| PGSC0003DMT400066897 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 84.25 | 85.61 |
| Solyc01g091200.2.1 | Tomato | nucleus | 84.93 | 85.52 |
| AT1G02000.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 84.7 | 85.48 |
| VIT_15s0048g00330.t01 | Wine grape | plastid | 82.65 | 84.78 |
| PGSC0003DMT400018060 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 82.65 | 83.22 |
| Solyc05g050990.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion | 82.42 | 82.99 |
| PGSC0003DMT400024810 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 82.19 | 82.76 |
| Solyc10g018260.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 81.74 | 82.3 |
| VIT_15s0048g00320.t01 | Wine grape | cytosol, endoplasmic reticulum, golgi, mitochondrion | 83.79 | 78.92 |
| KRH04016 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 71.92 | 73.26 |
| KRH57292 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 71.46 | 72.96 |
| KRH40009 | Soybean | plastid | 63.24 | 68.06 |
| KRH02967 | Soybean | nucleus | 66.44 | 67.52 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 66.21 | 67.29 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 62.1 | 65.38 |
| KRG97348 | Soybean | endoplasmic reticulum | 61.87 | 61.73 |
| KRH31569 | Soybean | mitochondrion | 64.38 | 61.04 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 61.87 | 54.97 |
| KRH41129 | Soybean | nucleus | 20.78 | 26.0 |
| KRH60045 | Soybean | extracellular | 20.55 | 25.71 |
| KRH59827 | Soybean | extracellular, golgi | 20.55 | 25.71 |
| KRH41316 | Soybean | extracellular, golgi | 20.32 | 25.43 |
| KRH51264 | Soybean | plastid | 20.32 | 25.36 |
| KRG99450 | Soybean | cytosol, mitochondrion, nucleus | 3.65 | 23.19 |
| KRH00406 | Soybean | cytosol, mitochondrion, nucleus | 3.65 | 23.19 |
| KRH26241 | Soybean | cytosol | 2.74 | 22.64 |
| KRH77652 | Soybean | plastid | 20.09 | 22.51 |
| KRH27832 | Soybean | plastid | 19.86 | 22.42 |
| KRH43065 | Soybean | golgi, mitochondrion, plastid | 21.23 | 22.36 |
| KRH59194 | Soybean | golgi, mitochondrion | 20.78 | 21.88 |
| KRH11871 | Soybean | golgi, plastid | 20.55 | 21.69 |
| KRH36892 | Soybean | golgi, mitochondrion | 20.55 | 21.69 |
| KRH46062 | Soybean | cytosol | 20.55 | 14.71 |
| KRH27429 | Soybean | cytosol, mitochondrion, plastid | 21.46 | 14.05 |
| KRH21867 | Soybean | cytosol, mitochondrion, plastid | 21.46 | 14.05 |
| KRG98907 | Soybean | cytosol, mitochondrion, peroxisome | 20.78 | 13.79 |
| KRH13001 | Soybean | cytosol, mitochondrion, plastid | 21.0 | 13.77 |
| KRH43408 | Soybean | nucleus | 21.0 | 13.77 |
| KRH04933 | Soybean | cytosol, mitochondrion, plastid | 19.41 | 13.2 |
| KRH16155 | Soybean | cytosol | 19.18 | 12.82 |
| KRH57264 | Soybean | endoplasmic reticulum | 2.05 | 4.31 |
| KRH03995 | Soybean | plastid | 2.97 | 4.3 |
| KRH77471 | Soybean | cytosol, endoplasmic reticulum | 2.51 | 3.96 |
| KRH57441 | Soybean | cytosol | 2.28 | 3.22 |
Protein Annotations
| EntrezGene:100790218 | MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | EMBL:ACUP02001328 | InterPro:Epimerase_deHydtase |
| EnsemblPlantsGene:GLYMA_03G027300 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016857 | GO:GO:0050662 |
| UniProt:I1JKP6 | EnsemblPlants:KRH65316 | ProteinID:KRH65316 | ProteinID:KRH65316.1 | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim |
| PFAM:PF01370 | PRINTS:PR01713 | PANTHER:PTHR43574 | PANTHER:PTHR43574:SF22 | SUPFAM:SSF51735 | TMHMM:TMhelix |
| UniParc:UPI00023397BF | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:3004521..3007401
Molecular Weight (calculated)
48601.4 Da
IEP (calculated)
10.332
GRAVY (calculated)
-0.219
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQLKQMSHI DSAPPTPGKF KMDKASYFNR VRWHTSLAKL AVWSFVFLGA ILIFFLRSPA SSPVPADLSR RSLRTYNWGG PVWEKRVRAS AQVRSRNGFA
101: VLVTGAAGFV GTHVSAALKR RGDGVLGLDN FNDYYDPSLK RARQGLLERN GVYIVEGDIN DEALLRKLFE VVPFTHVMHL AAQAGVRYAM ENPGSYVHSN
201: IAGFVNLLEV CKSVNPQPAI VWASSSSVYG LNTKVPFSER DRTDQPASLY AATKKAGEEI AHTYNHIYGL SLTGLRFFTV YGPWGRPDMA YFFFTRDLLK
301: GKPIPIFEAA NHGTVARDFT YIDDIVRGCL GALDTAEKST GSGGKKRGPA QLRVFNLGNT SPVPVSDLVS ILERLLKVKA KRNIMKLPRN GDVQFTHANI
401: SYAQSELGYK PTTDLQSGLK KFVRWYLNYY SGGKKAVE
101: VLVTGAAGFV GTHVSAALKR RGDGVLGLDN FNDYYDPSLK RARQGLLERN GVYIVEGDIN DEALLRKLFE VVPFTHVMHL AAQAGVRYAM ENPGSYVHSN
201: IAGFVNLLEV CKSVNPQPAI VWASSSSVYG LNTKVPFSER DRTDQPASLY AATKKAGEEI AHTYNHIYGL SLTGLRFFTV YGPWGRPDMA YFFFTRDLLK
301: GKPIPIFEAA NHGTVARDFT YIDDIVRGCL GALDTAEKST GSGGKKRGPA QLRVFNLGNT SPVPVSDLVS ILERLLKVKA KRNIMKLPRN GDVQFTHANI
401: SYAQSELGYK PTTDLQSGLK KFVRWYLNYY SGGKKAVE
001: MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS
Arabidopsis Description
GAE3GAE3 [Source:UniProtKB/TrEMBL;Acc:A0A178V2K1]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.