Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G00110.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 92.4 | 93.26 |
| PGSC0003DMT400066897 | Potato | endoplasmic reticulum, golgi, mitochondrion, plastid | 85.02 | 85.61 |
| Solyc01g091200.2.1 | Tomato | nucleus | 85.02 | 84.83 |
| KRH65316 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 85.48 | 84.7 |
| KRH76209 | Soybean | endoplasmic reticulum, plastid | 85.25 | 84.47 |
| AT2G45310.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 83.18 | 82.61 |
| PGSC0003DMT400024810 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 82.72 | 82.53 |
| Solyc05g050990.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion | 82.49 | 82.3 |
| PGSC0003DMT400018060 | Potato | cytosol, endoplasmic reticulum, golgi, plastid | 82.49 | 82.3 |
| Solyc10g018260.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 82.26 | 82.07 |
| AT4G12250.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 73.73 | 73.39 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 68.2 | 69.0 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 66.36 | 62.61 |
| AT4G23920.1 | Thale cress | cytosol | 20.74 | 25.71 |
| AT4G10960.1 | Thale cress | golgi | 20.51 | 25.36 |
| AT1G12780.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 20.51 | 25.36 |
| AT1G63180.1 | Thale cress | cytosol | 20.51 | 25.36 |
| AT1G64440.1 | Thale cress | cytosol, golgi | 19.35 | 24.14 |
| AT1G30620.4 | Thale cress | golgi, mitochondrion | 20.74 | 21.48 |
| AT4G20460.1 | Thale cress | golgi, mitochondrion | 20.05 | 21.17 |
| AT5G44480.1 | Thale cress | mitochondrion | 20.51 | 20.41 |
| AT2G34850.2 | Thale cress | cytosol | 10.37 | 19.07 |
| AT3G14790.2 | Thale cress | mitochondrion | 21.66 | 14.09 |
| AT1G53500.1 | Thale cress | cytosol, extracellular, peroxisome | 21.2 | 13.79 |
| AT1G78570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 21.2 | 13.75 |
| AT3G28530.1 | Thale cress | cytosol, nucleus | 0.69 | 12.0 |
| AT1G63000.1 | Thale cress | cytosol | 3.0 | 4.32 |
Protein Annotations
| MapMan:3.13.4.1 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | EntrezGene:839289 | UniProt:A0A178WEE4 | ProteinID:AAF76478.1 |
| ProteinID:AEE27364.1 | EMBL:AF334734 | EMBL:AK228396 | ArrayExpress:AT1G02000 | EnsemblPlantsGene:AT1G02000 | RefSeq:AT1G02000 |
| TAIR:AT1G02000 | RefSeq:AT1G02000-TAIR-G | EnsemblPlants:AT1G02000.1 | TAIR:AT1G02000.1 | EMBL:AY084754 | InterPro:Epimerase_deHydtase |
| Symbol:GAE2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 | GO:GO:0016857 | GO:GO:0032580 | GO:GO:0050378 |
| GO:GO:0050662 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_171702.1 | InterPro:Nuc_sugar_epim | ProteinID:OAP16494.1 | PFAM:PF01370 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR01713 |
| PANTHER:PTHR43574 | PANTHER:PTHR43574:SF22 | UniProt:Q9LPC1 | SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI00000481A2 |
Description
GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
Coordinates
chr1:+:345516..347603
Molecular Weight (calculated)
48135.8 Da
IEP (calculated)
10.482
GRAVY (calculated)
-0.206
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.