Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G23920.1 | Thale cress | cytosol | 100.0 | 7.14 |
| AT4G10960.1 | Thale cress | golgi | 80.0 | 5.7 |
| Os05t0595100-01 | Rice | plastid | 72.0 | 5.08 |
| AT1G64440.1 | Thale cress | cytosol, golgi | 68.0 | 4.89 |
| TraesCS1D01G451900.1 | Wheat | endoplasmic reticulum, golgi | 68.0 | 4.8 |
| Zm00001d029151_P002 | Maize | extracellular, golgi | 68.0 | 4.79 |
| VIT_02s0025g01580.t01 | Wine grape | golgi | 64.0 | 4.6 |
| VIT_02s0025g01560.t01 | Wine grape | golgi | 64.0 | 4.6 |
| TraesCS1A01G443900.1 | Wheat | endoplasmic reticulum, golgi | 64.0 | 4.52 |
| TraesCS1B01G478400.1 | Wheat | endoplasmic reticulum, golgi | 64.0 | 4.52 |
| EER94859 | Sorghum | extracellular, golgi | 64.0 | 4.51 |
| Solyc08g082440.2.1 | Tomato | cytosol, golgi | 56.0 | 3.99 |
| PGSC0003DMT400031994 | Potato | golgi | 56.0 | 3.99 |
| KRH27832 | Soybean | plastid | 60.0 | 3.87 |
| KRH77652 | Soybean | plastid | 56.0 | 3.58 |
| AT1G12780.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 48.0 | 3.42 |
| AT1G63180.1 | Thale cress | cytosol | 44.0 | 3.13 |
| AT2G34850.2 | Thale cress | cytosol | 28.0 | 2.97 |
| AT4G20460.1 | Thale cress | golgi, mitochondrion | 28.0 | 1.7 |
| AT5G44480.1 | Thale cress | mitochondrion | 24.0 | 1.38 |
| AT1G30620.4 | Thale cress | golgi, mitochondrion | 20.0 | 1.19 |
| AT3G23820.1 | Thale cress | endoplasmic reticulum | 20.0 | 1.09 |
| AT1G63000.1 | Thale cress | cytosol | 12.0 | 1.0 |
| AT4G30440.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 12.0 | 0.7 |
| AT4G00110.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 12.0 | 0.7 |
| AT1G02000.1 | Thale cress | endoplasmic reticulum, golgi, mitochondrion, plastid | 12.0 | 0.69 |
| AT4G12250.1 | Thale cress | cytosol, endoplasmic reticulum, golgi | 12.0 | 0.69 |
| AT2G45310.1 | Thale cress | cytosol, endoplasmic reticulum, golgi, plastid | 12.0 | 0.69 |
| AT1G53500.1 | Thale cress | cytosol, extracellular, peroxisome | 12.0 | 0.45 |
| AT3G14790.2 | Thale cress | mitochondrion | 12.0 | 0.45 |
| AT1G78570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 12.0 | 0.45 |
| HORVU1Hr1G095430.8 | Barley | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:AT3G28530 | EnsemblPlants:AT3G28530.1 | EnsemblPlantsGene:AT3G28530 | EntrezGene:822483 | Gene3D:3.90.25.10 | PO:PO:0000293 |
| ProteinID:AEE77456.1 | RefSeq:AT3G28530 | RefSeq:AT3G28530-TAIR-G | RefSeq:NP_189494.1 | SEG:seg | TAIR:AT3G28530 |
| TAIR:AT3G28530.1 | UniParc:UPI00001635A7 | UniProt:Q3EAY3 | MapMan:35.2 | : | : |
Description
UDP-glucose 4-epimerase [Source:UniProtKB/TrEMBL;Acc:Q3EAY3]
Coordinates
chr3:+:10690637..10690714
Molecular Weight (calculated)
2798.0 Da
IEP (calculated)
6.155
GRAVY (calculated)
-1.116
Length
25 amino acids
Sequence
(BLAST)
(BLAST)
1: MCRDLWNWAS NNPYGYNSSS NGSSS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.