Subcellular Localization
min:
: max
Winner_takes_all: golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400031994 | Potato | golgi | 98.86 | 98.86 |
| Solyc12g055930.1.1 | Tomato | cytosol, extracellular, golgi | 83.48 | 84.2 |
| VIT_02s0025g01580.t01 | Wine grape | golgi | 81.77 | 82.47 |
| VIT_02s0025g01560.t01 | Wine grape | golgi | 81.48 | 82.18 |
| EER94859 | Sorghum | extracellular, golgi | 80.06 | 79.15 |
| Os05t0595100-01 | Rice | plastid | 79.77 | 79.1 |
| Zm00001d029151_P002 | Maize | extracellular, golgi | 79.77 | 78.87 |
| TraesCS1B01G478400.1 | Wheat | endoplasmic reticulum, golgi | 78.06 | 77.4 |
| TraesCS1A01G443900.1 | Wheat | endoplasmic reticulum, golgi | 78.06 | 77.4 |
| TraesCS1D01G451900.1 | Wheat | endoplasmic reticulum, golgi | 77.78 | 77.12 |
| KRH27832 | Soybean | plastid | 82.34 | 74.48 |
| KRH77652 | Soybean | plastid | 81.2 | 72.89 |
| Solyc08g080570.2.1 | Tomato | cytosol | 66.38 | 66.38 |
| HORVU1Hr1G095430.8 | Barley | cytosol, nucleus | 65.81 | 61.27 |
| AT3G28530.1 | Thale cress | cytosol, nucleus | 3.99 | 56.0 |
| Solyc07g043550.2.1 | Tomato | cytosol, unclear | 36.18 | 42.05 |
| Solyc12g006410.1.1 | Tomato | unclear | 40.17 | 35.34 |
| Solyc02g069580.2.1 | Tomato | golgi, mitochondrion | 41.6 | 35.01 |
| Solyc02g030230.2.1 | Tomato | mitochondrion | 41.31 | 34.86 |
| Solyc07g006220.1.1 | Tomato | nucleus | 26.78 | 22.12 |
| Solyc05g053790.1.1 | Tomato | cytosol, endoplasmic reticulum, golgi | 26.78 | 21.71 |
| Solyc12g010540.1.1 | Tomato | endoplasmic reticulum | 26.5 | 21.53 |
| Solyc03g083550.1.1 | Tomato | golgi | 23.93 | 20.69 |
| Solyc09g092330.1.1 | Tomato | nucleus | 26.5 | 20.58 |
| Solyc08g079440.1.1 | Tomato | nucleus | 25.64 | 20.22 |
| Solyc10g018260.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion, plastid | 24.5 | 19.77 |
| Solyc05g050990.1.1 | Tomato | endoplasmic reticulum, golgi, mitochondrion | 23.93 | 19.31 |
| Solyc01g091200.2.1 | Tomato | nucleus | 23.65 | 19.08 |
| Solyc08g069110.2.1 | Tomato | unclear | 24.5 | 13.21 |
| Solyc07g062130.2.1 | Tomato | extracellular, unclear | 24.22 | 12.61 |
| Solyc10g007480.2.1 | Tomato | nucleus | 19.66 | 11.69 |
| Solyc08g080140.2.1 | Tomato | extracellular | 4.84 | 5.65 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | MapMan:3.13.8 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003978 | GO:GO:0005975 | GO:GO:0006012 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016853 | GO:GO:0016857 | UniProt:K4CPP0 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | InterPro:Nuc_sugar_epim |
| PFAM:PF16363 | PRINTS:PR01713 | PANTHER:PTHR43725 | PANTHER:PTHR43725:SF11 | SUPFAM:SSF51735 | EnsemblPlantsGene:Solyc08g082440.2 |
| EnsemblPlants:Solyc08g082440.2.1 | TIGRFAMs:TIGR01179 | InterPro:UDP_G4E | UniParc:UPI000276C6BC | SEG:seg | : |
Description
No Description!
Coordinates
chr8:+:65248609..65252848
Molecular Weight (calculated)
38690.4 Da
IEP (calculated)
7.202
GRAVY (calculated)
-0.261
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKSILVTGG AGYIGSHTVL QLLLGGYKTV VIDNLDNSSE IAVKRVKEIA GEYGSNLSFH KVDLRDKPAI EEIFRSNKFD AVIHFAGLKA VGESVEKPLM
101: YYDNNLIGTI TLLEVMAAHG CKKLVFSSSA TVYGWPKVVP CTEEFPLSAA NPYGRTKLFI EEICRDVQNA DSEWKIILLR YFNPVGAHPS GRIGEDPRGI
201: PNNLMPFVQQ VAVGRRKELT VYGTDYGTKD GTGVRDYIHV IDLADGHIAA LQKLSDPSIG CEVYNLGTGK GTSVLEMVAA FEKASGKKIP MVMSGRRPGD
301: AEIVYAATEK AERELKWKAK YGIEEMCRDQ WNWAKKNPYG YEGTPESNNC H
101: YYDNNLIGTI TLLEVMAAHG CKKLVFSSSA TVYGWPKVVP CTEEFPLSAA NPYGRTKLFI EEICRDVQNA DSEWKIILLR YFNPVGAHPS GRIGEDPRGI
201: PNNLMPFVQQ VAVGRRKELT VYGTDYGTKD GTGVRDYIHV IDLADGHIAA LQKLSDPSIG CEVYNLGTGK GTSVLEMVAA FEKASGKKIP MVMSGRRPGD
301: AEIVYAATEK AERELKWKAK YGIEEMCRDQ WNWAKKNPYG YEGTPESNNC H
001: MMARNVLVSG GAGYIGSHTV LQLLLGGYSV VVVDNLDNSS AVSLQRVKKL AAEHGERLSF HQVDLRDRSA LEKIFSETKF DAVIHFAGLK AVGESVEKPL
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H
101: LYYNNNLVGT ITLLEVMAQH GCKNLVFSSS ATVYGSPKEV PCTEEFPISA LNPYGRTKLF IEEICRDVYG SDPEWKIILL RYFNPVGAHP SGDIGEDPRG
201: IPNNLMPFVQ QVAVGRRPHL TVFGNDYNTK DGTGVRDYIH VIDLADGHIA ALRKLEDCKI GCEVYNLGTG NGTSVLEMVD AFEKASGKKI PLVIAGRRPG
301: DAEVVYASTE RAESELNWKA KYGIEEMCRD LWNWASNNPY GYDSSSEDNS H
Arabidopsis Description
UGE5UDP-glucose 4-epimerase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SN58]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.