CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

plastid 1
cytosol 2
golgi 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46062	Soybean	cytosol	85.76	92.48
VIT_19s0014g00290.t01	Wine grape	cytosol, mitochondrion, plastid	77.58	75.85
KRH21867	Soybean	cytosol, mitochondrion, plastid	76.82	75.78
KRH27429	Soybean	cytosol, mitochondrion, plastid	76.52	75.49
KRH13001	Soybean	cytosol, mitochondrion, plastid	76.06	75.15
KRH43408	Soybean	nucleus	75.61	74.7
TraesCS5B01G023700.1	Wheat	cytosol, mitochondrion, plastid	75.3	74.51
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	75.15	74.36
Solyc07g062130.2.1	Tomato	extracellular, unclear	75.0	73.44
PGSC0003DMT400018192	Potato	cytosol, mitochondrion, plastid	74.39	72.85
GSMUA_Achr4P02550_001	Banana	mitochondrion	48.33	69.96
Zm00001d037784_P002	Maize	endoplasmic reticulum	73.48	69.68
KXG21627	Sorghum	mitochondrion	71.67	68.95
HORVU5Hr1G007050.2	Barley	plastid	75.3	68.55
KRH16155	Soybean	cytosol	65.45	65.95
KRH04933	Soybean	cytosol, mitochondrion, plastid	63.79	65.37
KRH03995	Soybean	plastid	26.97	58.94
KRH57264	Soybean	endoplasmic reticulum	18.64	58.85
KRH77471	Soybean	cytosol, endoplasmic reticulum	24.09	57.19
CDX81794	Canola	plastid	30.0	57.06
KRH57441	Soybean	cytosol	26.67	56.59
KRH41316	Soybean	extracellular, golgi	13.03	24.57
KRH51264	Soybean	plastid	12.88	24.22
KRH60045	Soybean	extracellular	12.73	24.0
KRH26241	Soybean	cytosol	1.82	22.64
KRH77652	Soybean	plastid	13.03	21.99
KRH27832	Soybean	plastid	12.88	21.91
KRG99450	Soybean	cytosol, mitochondrion, nucleus	2.27	21.74
KRH00406	Soybean	cytosol, mitochondrion, nucleus	2.27	21.74
KRH41129	Soybean	nucleus	11.52	21.71
KRH59827	Soybean	extracellular, golgi	11.52	21.71
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	13.94	21.4
KRH11871	Soybean	golgi, plastid	13.33	21.2
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	13.64	20.98
KRH58854	Soybean	endoplasmic reticulum, golgi	13.18	20.91
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	13.64	20.88
KRH02967	Soybean	nucleus	13.64	20.88
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	13.79	20.78
KRH36892	Soybean	golgi, mitochondrion	13.03	20.72
KRH43065	Soybean	golgi, mitochondrion, plastid	13.03	20.67
KRH76209	Soybean	endoplasmic reticulum, plastid	13.64	20.55
KRH59194	Soybean	golgi, mitochondrion	12.88	20.43
KRH40009	Soybean	plastid	12.27	19.9
KRG97348	Soybean	endoplasmic reticulum	13.03	19.59
KRH31569	Soybean	mitochondrion	13.18	18.83
KRH42756	Soybean	extracellular, golgi, plastid	13.18	17.65

Protein Annotations

EMBL:ACUP02010931	EnsemblPlants:KRG98907	EnsemblPlantsGene:GLYMA_18G106300	EntrezGene:100810341	Gene3D:3.40.50.720	Gene3D:3.90.25.10
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000	PANTHER:PTHR43000:SF8	PFAM:PF16363	ProteinID:KRG98907
ProteinID:KRG98907.1	ProteinID:KRG98908.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000233E404	UniProt:K7MR59
MapMan:3.13.6.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:11900989..11903222

Molecular Weight (calculated)

74380.9 Da

IEP (calculated)

6.656

GRAVY (calculated)

-0.286

Length

660 amino acids

Sequence
(BLAST)

001: MANTYKPKNI LITGAAGFIA SHVCNRIVRN YPDYKIIVLD KLDYCSNLKN LIPSRSSPNF KFIKGDIGSA DLVNYILLTE SIDTIMHFAA QTHVDNSFGN
101: SFEFTKNNIY GTHVLLEACK VSKGQVKRFI HVSTDEVYGE TDEDAVVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: LIPKFLLLAM KGRTLPIHGD GSNVRSYLYC EDVAEAFEII LHRGEVGHVY NIGTKKERRV IDVARDICRF FNLDPDTHVK FVENRPFNDQ RYFLDDEKLK
301: DLGWSEGTTW EEGLRKTMDW YVKNPDWWGD VSGALLPHPR MLTMPGVEKY YDGSDNVTGT ASNGDVNHSN QNRMVVVPAT RNNVSPQKAS LKFLIYGGAG
401: WIGGLIGNIC EKQGIPFEYG MARLDDRSQI LFDFRTIKPT HVFNASGVIG ALNVKWFEAH KPETIRAVVV GVLTLADVCR DHGLLMMNYA FGGNLEDKAY
501: STDAFYFRTQ AKVEELLKEY ENVCTLRIQL PVSSDLSNPH NLITMITRSD KVANIPNSIT VLDELVPISI EMAKRNCRGI WNFTNPGTVT CNEILEMYKD
601: YVDPTFKWVN FTLEQQAHVP SPSTNEMDSS KLKKEFPELL PVKDSLIKYV FEPEKKSLGF

Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)

001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT

Arabidopsis Description

RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.