CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037784_P002	Maize	endoplasmic reticulum	94.17	92.82
TraesCS5B01G023700.1	Wheat	cytosol, mitochondrion, plastid	86.88	89.36
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	86.59	89.06
KRH13001	Soybean	cytosol, mitochondrion, plastid	80.76	82.93
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	81.05	82.74
EER95086	Sorghum	cytosol, mitochondrion, plastid	80.9	82.59
HORVU5Hr1G007050.2	Barley	plastid	87.03	82.34
VIT_19s0014g00290.t01	Wine grape	cytosol, mitochondrion, plastid	80.9	82.22
KRH27429	Soybean	cytosol, mitochondrion, plastid	80.17	82.21
KRH21867	Soybean	cytosol, mitochondrion, plastid	80.17	82.21
KRH43408	Soybean	nucleus	79.88	82.04
GSMUA_Achr4P02550_001	Banana	mitochondrion	54.37	81.8
Solyc07g062130.2.1	Tomato	extracellular, unclear	79.45	80.86
PGSC0003DMT400018192	Potato	cytosol, mitochondrion, plastid	77.99	79.38
EES07456	Sorghum	cytosol, peroxisome, plastid	33.82	75.57
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	68.95	71.67
KRH46062	Soybean	cytosol	62.83	70.42
CDX81794	Canola	plastid	32.51	64.27
EER94859	Sorghum	extracellular, golgi	12.24	23.66
EER98731	Sorghum	plastid	12.24	22.95
KXG36042	Sorghum	cytosol	11.81	22.25
EER95001	Sorghum	mitochondrion	12.83	21.62
EER95854	Sorghum	mitochondrion, plastid	12.83	20.47
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	12.97	20.27
OQU75981	Sorghum	endoplasmic reticulum	12.97	20.23
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	12.39	20.09
KXG27129	Sorghum	mitochondrion, plastid	11.81	19.52
EER95171	Sorghum	plastid	13.41	19.17
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	13.27	19.0
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	12.39	17.21

Protein Annotations

EnsemblPlants:KXG21627	EnsemblPlantsGene:SORBI_3009G089200	EntrezGene:8058299	Gene3D:3.40.50.720	Gene3D:3.90.25.10	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	InterPro:RmlD-like-bd	PANTHER:PTHR43000	PANTHER:PTHR43000:SF15	PFAM:PF04321	PFAM:PF16363
ProteinID:KXG21627	ProteinID:KXG21627.1	SUPFAM:SSF51735	UniParc:UPI00081ACEE1	UniProt:A0A1B6P7F8	MapMan:3.13.6.1

Description

hypothetical protein

Coordinates

chr9:-:15461161..15467515

Molecular Weight (calculated)

77392.9 Da

IEP (calculated)

7.010

GRAVY (calculated)

-0.297

Length

686 amino acids

Sequence
(BLAST)

001: MLGVRFLLRQ QDSKSNHTGD MARPYKPKNI LITGAAGFIA SHVAIRVTKK YPDYKIVVLD KLDYCSNLKN LLPVSSSPNF KFVKGDIASA DLVNFLLVTE
101: KIDTIMHFAA QTHVDNSFGN SFEFTKNNIY GTHVLLEACR ITGQIKRFIH VSTDEVYGET DEDAVVGNHE ASQLLPTNPY AATKAGAEML VMAYGRSYGL
201: PVITSRGNNV FGPNQFPEKL IPKFILLAMR GEPLPIHGDG GNVRSYIYCE DVAEAFEVIL HHGEVGHVYN IGTKRERTVI DVAKDVCKLF SLEAGKVIMF
301: VENRPFNDQR YFLDDEKLKS LGWAERTPWE EGLKKTMEWY VANSDYWGDV SGALLPHPRT LMMPGYEGSE EIKGILSQFN NIQTKVTSTL DTALETHAFK
401: FLVYGRTGWI GGLLGKICEK KGIPYEYGKG RLQERSSLNL DIQTIKPTHV FNAAGVTGRP NVDWCESHKP DTIRTNVVGT LNLADVCREH GLLMMNYATG
501: CIFEYDADHP EGSGIGFKEE DTPNFTGSFY SKTKAMVEEL LREYENVCTL RVRMPISSDL NNPRNFVTKI SRYNKVVNIP NSMTMLDELL PISVEMAKRN
601: LRGIYNFTNP GVVSHNEILE MYKQYIDPSF KWTNFTLEEQ AKVIVAPRSN NEMDATKLKK EFPELLSIKD SLIKFVFEPN RKVPIN

Best Arabidopsis Sequence Match ( AT1G78570.1 )
(BLAST)

001: MASYTPKNIL ITGAAGFIAS HVANRLIRSY PDYKIVVLDK LDYCSNLKNL NPSKHSPNFK FVKGDIASAD LVNHLLITEG IDTIMHFAAQ THVDNSFGNS
101: FEFTKNNIYG THVLLEACKV TGQIRRFIHV STDEVYGETD EDALVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP VITTRGNNVY GPNQFPEKLI
201: PKFILLAMRG QVLPIHGDGS NVRSYLYCED VAEAFEVVLH KGEVGHVYNI GTKKERRVND VAKDICKLFN MDPEANIKFV DNRPFNDQRY FLDDQKLKKL
301: GWSERTTWEE GLKKTMDWYT QNPEWWGDVS GALLPHPRML MMPGGRHFDG SEDNSLAATL SEKPSQTHMV VPSQRSNGTP QKPSLKFLIY GKTGWIGGLL
401: GKICDKQGIA YEYGKGRLED RSSLLQDIQS VKPTHVFNSA GVTGRPNVDW CESHKTETIR ANVAGTLTLA DVCREHGLLM MNFATGCIFE YDDKHPEGSG
501: IGFKEEDTPN FTGSFYSKTK AMVEELLKEY DNVCTLRVRM PISSDLNNPR NFITKISRYN KVVNIPNSMT VLDELLPISI EMAKRNLKGI WNFTNPGVVS
601: HNEILEMYRD YINPEFKWAN FTLEEQAKVI VAPRSNNEMD ASKLKKEFPE LLSIKESLIK YAYGPNKKT

Arabidopsis Description

RHM1Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM5]
SUBAcon: [mitochondrion,peroxisome,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.