CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
golgi 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0129700-01	Rice	mitochondrion	93.37	93.6
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	90.66	91.11
HORVU7Hr1G074300.2	Barley	golgi	90.42	90.86
Zm00001d047683_P003	Maize	mitochondrion	94.1	90.33
TraesCS7A01G311100.1	Wheat	golgi	89.68	90.12
Zm00001d028825_P001	Maize	golgi, mitochondrion	93.37	90.05
TraesCS7B01G210700.2	Wheat	golgi	90.42	89.1
Solyc07g043550.2.1	Tomato	cytosol, unclear	61.18	82.45
GSMUA_Achr3P23390_001	Banana	mitochondrion	83.29	81.3
GSMUA_Achr11P...	Banana	mitochondrion	83.05	81.06
CDY71965	Canola	cytosol, mitochondrion	47.17	80.67
AT2G34850.2	Thale cress	cytosol	46.68	80.51
KXG27129	Sorghum	mitochondrion, plastid	81.33	79.76
PGSC0003DMT400080637	Potato	golgi	77.15	78.5
AT4G20460.1	Thale cress	golgi, mitochondrion	77.64	76.89
KRH36892	Soybean	golgi, mitochondrion	78.38	76.87
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	78.62	76.74
KRH11871	Soybean	golgi, plastid	78.13	76.63
PGSC0003DMT400041159	Potato	golgi, mitochondrion	72.73	76.29
Bra032409.1-P	Field mustard	mitochondrion	78.38	76.13
AT1G30620.4	Thale cress	golgi, mitochondrion	78.38	76.13
CDY29113	Canola	golgi	76.9	75.97
Solyc02g030230.2.1	Tomato	mitochondrion	77.64	75.96
KRH59194	Soybean	golgi, mitochondrion	77.64	75.96
CDY09555	Canola	mitochondrion	78.38	75.95
CDY02312	Canola	mitochondrion	78.38	75.95
PGSC0003DMT400054459	Potato	mitochondrion	77.64	75.78
CDX78998	Canola	mitochondrion	76.41	75.67
CDY13102	Canola	golgi	76.41	75.49
Bra027557.1-P	Field mustard	golgi	76.41	75.49
KRH43065	Soybean	golgi, mitochondrion, plastid	77.15	75.48
CDX82768	Canola	mitochondrion	76.17	75.43
EER95854	Sorghum	mitochondrion, plastid	79.12	74.88
Bra033746.1-P	Field mustard	golgi	75.68	74.76
Solyc12g006410.1.1	Tomato	unclear	73.22	74.69
CDY49015	Canola	golgi	75.43	74.51
CDY49498	Canola	golgi	75.18	74.27
Bra020917.1-P	Field mustard	golgi, mitochondrion	74.94	74.21
CDY52524	Canola	golgi	77.15	74.06
CDY31644	Canola	golgi	76.41	73.35
AT5G44480.1	Thale cress	mitochondrion	75.43	70.41
Bra005387.1-P	Field mustard	golgi, mitochondrion	76.9	68.94
Bra013466.1-P	Field mustard	mitochondrion	74.94	65.87
KXG36042	Sorghum	cytosol	36.85	41.21
EER94859	Sorghum	extracellular, golgi	35.87	41.13
EER98731	Sorghum	plastid	35.63	39.62
EES14924	Sorghum	endoplasmic reticulum, golgi, plastid	38.33	36.88
EES05940	Sorghum	endoplasmic reticulum, golgi, plastid	22.36	20.73
OQU75981	Sorghum	endoplasmic reticulum	22.11	20.45
EER95171	Sorghum	plastid	21.87	18.54
EER99141	Sorghum	cytosol, endoplasmic reticulum, golgi, plastid	21.87	18.02
EES14210	Sorghum	cytosol, extracellular, golgi, plastid	20.88	17.75
EER95086	Sorghum	cytosol, mitochondrion, plastid	22.36	13.54
EER95078	Sorghum	cytosol, mitochondrion, peroxisome	22.11	13.39
KXG21627	Sorghum	mitochondrion	21.62	12.83
EES07456	Sorghum	cytosol, peroxisome, plastid	2.95	3.91

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	EntrezGene:8081102
UniProt:C5WML3	EnsemblPlants:EER95001	ProteinID:EER95001	ProteinID:EER95001.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0003978	GO:GO:0005975	GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853
InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363	PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	MetaCyc:PWY-3821
MetaCyc:PWY-6317	MetaCyc:PWY-6397	MetaCyc:PWY-6527	MetaCyc:PWY-7328	MetaCyc:PWY-7344	EnsemblPlantsGene:SORBI_3001G400000
SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI0001A82F61	RefSeq:XP_002468003.1	:

Description

hypothetical protein

Coordinates

chr1:-:68538129..68543114

Molecular Weight (calculated)

44683.8 Da

IEP (calculated)

9.251

GRAVY (calculated)

-0.212

Length

407 amino acids

Sequence
(BLAST)

001: MIPLNRRASL PRAGMEYFDA RRKPHNVGKI IAALVLTTVC IFVLKQSPGF GGNSVFSRHE PGVTHVLVTG GAGYIGSHAA LRLLKDNYRV TIVDNLSRGN
101: MGAVKVLQGL FPQPGRLQFI FADLGDQKSV NKIFAENAFD AVMHFAAVAY VGESTLEPLR YYHNITSNTL LILEAMASHG VKTLIYSSTC ATYGEPEKMP
201: ITEATPQFPI NPYGKAKKMA EDIILDFSKS KGADMAVMIL RYFNVIGSDP EGRLGEAPRP ELREHGRISG ACFDAALGVI PGLKVKGTDY PTADGTCIRD
301: YIDVTDLVDA HVKALNKAEP RKVGIYNVGT GRGRSVNEFV DACKKATGVN IKIEYLSRRP GDYAEVYSDP TKINKELNWT AQYTDLKESL SVAWRWQKSH
401: PHGYGPN

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.