Factsheet for Zm00001d047683_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 1
mitochondrion 3
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028825_P001	Maize	golgi, mitochondrion	94.1	94.55
EER95001	Sorghum	mitochondrion	90.33	94.1
Os08t0129700-01	Rice	mitochondrion	85.38	89.16
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	82.55	86.42
HORVU7Hr1G074300.2	Barley	golgi	82.31	86.17
TraesCS7A01G311100.1	Wheat	golgi	81.6	85.43
TraesCS7B01G210700.2	Wheat	golgi	82.31	84.5
GSMUA_Achr3P23390_001	Banana	mitochondrion	76.18	77.46
GSMUA_Achr11P...	Banana	mitochondrion	75.94	77.22
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	72.88	61.19
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	65.33	60.88
Zm00001d029151_P002	Maize	extracellular, golgi	33.49	40.0
Zm00001d021249_P003	Maize	cytosol	33.25	38.84
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	31.6	38.73
Zm00001d017999_P002	Maize	mitochondrion	28.3	38.59
Zm00001d014509_P001	Maize	cytosol	25.71	37.98
Zm00001d005598_P001	Maize	plastid	32.31	37.53
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	34.91	34.99
Zm00001d020093_P002	Maize	golgi	24.29	34.11
Zm00001d018350_P001	Maize	plasma membrane	21.7	20.96
Zm00001d037087_P001	Maize	endoplasmic reticulum	20.28	19.55
Zm00001d045078_P001	Maize	extracellular, golgi	18.4	18.89
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	19.34	18.22
Zm00001d028427_P001	Maize	plastid	20.52	18.16
Zm00001d047915_P001	Maize	plastid	20.52	18.16
Zm00001d049804_P001	Maize	plasma membrane	19.1	18.08
Zm00001d021026_P001	Maize	endoplasmic reticulum	20.52	17.86
Zm00001d034293_P001	Maize	plastid	7.55	14.48
Zm00001d028654_P002	Maize	cytosol	19.58	12.35
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	19.58	12.35
Zm00001d037784_P002	Maize	endoplasmic reticulum	18.87	11.49
Zm00001d037310_P001	Maize	plastid	8.02	11.18
Zm00001d017794_P001	Maize	plastid	8.49	9.65
Zm00001d038116_P001	Maize	plastid	7.31	9.57
Zm00001d017601_P001	Maize	extracellular, peroxisome	3.3	4.56

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:100383292	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10
UniProt:A0A1D6PCE2	ProteinID:AQL07290.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PFAM:PF16363	PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E
UniParc:UPI00084333B1	EnsemblPlantsGene:Zm00001d047683	EnsemblPlants:Zm00001d047683_P003	EnsemblPlants:Zm00001d047683_T003	SEG:seg	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr9:-:139193291..139198582

Molecular Weight (calculated)

46759.6 Da

IEP (calculated)

9.317

GRAVY (calculated)

-0.129

Length

424 amino acids

Sequence
(BLAST)

001: MIPLNRRASL PRAGMEYFDA RRKPRNVGKI IAALVLTTLC IFALKQSPGF GGNSVFSRHE PGVTHVLVTG GAGYIGSHAA LRLLQDSYRV TIVDNLSRGN
101: MGAVKVLQGL FPQPGRLQFI FADLGDQKSV SSSMLLKLFC LCLFCLWRVT PEVFFSLNCL PAVAYVGEST LEPLRYYHNI TSNTLLILEA MASHGVKTLI
201: YSSTCATYGE PEKMPITEAT PQFPINPYGK AKKMAEDIIL DFSKSKGADM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ALGVITGLKV
301: KGTDYPTTDG TCIRDYIDVT DLVDAHVKAL NKAEPRKVSI YNVGTGRGRS VNEFVDACKK ATGVNIKIEY LSRRPGDYAE VYSDPTKINK ELNWTARYTD
401: LKESLSVAWR WQKSHPSGYG PNRI

Best Arabidopsis Sequence Match ( AT1G30620.1 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.