Factsheet for Zm00001d026311_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27129	Sorghum	mitochondrion, plastid	79.6	96.87
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	73.66	90.29
Os04t0618200-02	Rice	golgi	69.9	90.28
TraesCS2A01G460400.1	Wheat	unclear	73.47	90.05
TraesCS2B01G482000.1	Wheat	golgi	73.47	90.05
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	73.27	89.81
GSMUA_Achr8P33320_001	Banana	mitochondrion	65.35	79.14
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	69.11	76.7
Zm00001d028825_P001	Maize	golgi, mitochondrion	61.58	73.7
Zm00001d047683_P003	Maize	mitochondrion	61.19	72.88
Zm00001d029151_P002	Maize	extracellular, golgi	29.11	41.41
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	27.13	39.6
Zm00001d005598_P001	Maize	plastid	28.32	39.18
Zm00001d021249_P003	Maize	cytosol	27.92	38.84
Zm00001d017999_P002	Maize	mitochondrion	23.76	38.59
Zm00001d020093_P002	Maize	golgi	21.19	35.43
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	28.91	34.52
Zm00001d014509_P001	Maize	cytosol	18.61	32.75
Zm00001d018350_P001	Maize	plasma membrane	18.02	20.73
Zm00001d045078_P001	Maize	extracellular, golgi	16.44	20.1
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	17.43	19.56
Zm00001d037087_P001	Maize	endoplasmic reticulum	16.83	19.32
Zm00001d049804_P001	Maize	plasma membrane	17.03	19.2
Zm00001d021026_P001	Maize	endoplasmic reticulum	17.62	18.28
Zm00001d028427_P001	Maize	plastid	17.03	17.95
Zm00001d047915_P001	Maize	plastid	16.83	17.75
Zm00001d034293_P001	Maize	plastid	6.14	14.03
Zm00001d028654_P002	Maize	cytosol	16.83	12.65
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	16.44	12.35
Zm00001d037784_P002	Maize	endoplasmic reticulum	15.64	11.35
Zm00001d037310_P001	Maize	plastid	6.73	11.18
Zm00001d038116_P001	Maize	plastid	6.14	9.57
Zm00001d017794_P001	Maize	plastid	6.93	9.38
Zm00001d017601_P001	Maize	extracellular, peroxisome	2.57	4.23

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10	UniProt:A0A1D6JEI4
ProteinID:AQK46214.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975	GO:GO:0006012
GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363
PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI000843A435
EnsemblPlantsGene:Zm00001d026311	EnsemblPlants:Zm00001d026311_P001	EnsemblPlants:Zm00001d026311_T001	SEG:seg	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr10:+:143365795..143369286

Molecular Weight (calculated)

55664.8 Da

IEP (calculated)

8.448

GRAVY (calculated)

-0.177

Length

505 amino acids

Sequence
(BLAST)

001: MQIQRQGEGG RRVLVGFILG RRLHMPTTPR SRSQARTTRP WILSGMDFAD SRRKPNFTGK IAVAAALTVM CIIVLKQSPS FSGTSVVRAE SLHTNHPCHC
101: HLLLSWSLSL FLVPDDLNTL SFVFHGMEHQ VDEFIWELPC MVIGKDNCAT NDFSRHETGV THVLVTGGAG YIGSHATLRL LSDKYRVTIV DNLSRGNMGA
201: VRVLQRLFPE PGRLQFIYAD LGDAKAVKKI FSENAFDAVM HFAAVAYVGE STMEPLRYYH NITSNTLTVL EAMAAYNVNT LIYSSTCATY GEPDTMPIVE
301: TTPQNPINPY GKAKKMAEDI ILDFTKSKKQ SDMAVMILRY FNVIGSDPEG RLGEAPRPEL REHGRISGAC FDAALGIIPG LKVRGTDYST ADGTCIRDYI
401: DVTDLVDAHV KALGKAQPGK VGIYNVGTGQ GRSVTEFVEA CKKATGASIK VEYLARRPGD YAEVYSDPSK ILRDLNWTAQ YTDLGQSLAQ AWKWQKAHPN
501: GYASA

Best Arabidopsis Sequence Match ( AT1G30620.2 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.