Factsheet for Zm00001d014509_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028825_P001	Maize	golgi, mitochondrion	37.98	25.83
Zm00001d047683_P003	Maize	mitochondrion	37.98	25.71
GSMUA_Achr3P23390_001	Banana	mitochondrion	35.19	24.22
GSMUA_Achr11P...	Banana	mitochondrion	33.8	23.26
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	31.01	19.56
Zm00001d029151_P002	Maize	extracellular, golgi	24.04	19.44
Zm00001d021249_P003	Maize	cytosol	24.39	19.28
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	32.75	18.61
Zm00001d005598_P001	Maize	plastid	23.0	18.08
Zm00001d020093_P002	Maize	golgi	18.47	17.55
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	25.09	17.02
Zm00001d047915_P001	Maize	plastid	12.89	7.72
Zm00001d028427_P001	Maize	plastid	12.2	7.31
Zm00001d018350_P001	Maize	plasma membrane	10.45	6.83
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	10.45	6.67
Zm00001d037087_P001	Maize	endoplasmic reticulum	10.1	6.59
Zm00001d045078_P001	Maize	extracellular, golgi	9.06	6.3
Zm00001d049804_P001	Maize	plasma membrane	9.76	6.25
Zm00001d021026_P001	Maize	endoplasmic reticulum	10.1	5.95
Zm00001d028654_P002	Maize	cytosol	13.94	5.95
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	13.94	5.95
Zm00001d017999_P002	Maize	mitochondrion	6.27	5.79
Zm00001d017601_P001	Maize	extracellular, peroxisome	5.92	5.54
Zm00001d037784_P002	Maize	endoplasmic reticulum	12.54	5.17
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	4.18	3.47
Zm00001d034293_P001	Maize	plastid	2.44	3.17
Zm00001d017794_P001	Maize	plastid	3.14	2.41
Zm00001d037310_P001	Maize	plastid	2.44	2.3
Zm00001d038116_P001	Maize	plastid	1.74	1.54

Protein Annotations

EnsemblPlants:Zm00001d014509_P001	EnsemblPlants:Zm00001d014509_T001	EnsemblPlantsGene:Zm00001d014509	Gene3D:3.40.50.720	Gene3D:3.90.25.10	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	PFAM:PF16363	ProteinID:AQK66422.1	SUPFAM:SSF51735
UniParc:UPI000220790C	UniProt:A0A1D6GTV7	MapMan:35.1	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr5:-:50800838..50804750

Molecular Weight (calculated)

31435.0 Da

IEP (calculated)

8.776

GRAVY (calculated)

-0.703

Length

287 amino acids

Sequence
(BLAST)

001: MHDADLMLKG PTNVKKAQQQ SSIKITRNHT KIRVPTDARV VDPPTRPSFA SQIKGTDYPT TDGTCIRDYI DVTDLLDAHV KALNKQSLEK SAFTMLEQEE
101: VVINTLLNLH GRSVNEFVDA CKKAIGVYIK IEYLNRRPGD YAEVYSDPTK ISKELNWTTQ YTDLKESLSV AWRSGGGLRS ENSKGEVPPE EANGGAWHGE
201: GCAWSRMGGA GASRGVPNPR TGLPSMETAD ATTRTRTLMP GGGDDLGQRG TQSTREIGLS RTRIEGRRGD PGQRTHVPWI AESRGGV

Best Arabidopsis Sequence Match ( AT5G44480.2 )
(BLAST)

001: MLNSSGVRTQ RRSPRPLSLG EMDCLEPKTK NNLTGKLLLV ASLLILAIIV ISQSSSFTSP SAFSQREEGV THVLVTGGAG YIGSHAALRL LRDSYRVTIV
101: DNLSRGNLGA VKTLQQLFPQ TGRLQFIYAD LGDPLAVEKI FSENAFDAVM HFAAVAYVGE STLYPLKYYH NITSNTLGVL EAMARHKVKK LIYSSTCATY
201: GEPEKMPITE DTPQVPINPY GKAKKMAEDM ILDFSKNSDM AVMILRYFNV IGSDPGGRLG EAPRPELREQ GRISGACFDA ARGFIPGLQV KGTDYKTSDG
301: TCIRDYIDVT DLVDAHVKAL EKAQPRKVGI YNVGTGKGRS VKEFVEACKK ATGVEIKVDF LPRRPGDYAE VYSDPTKILK DLNWTARFTN LQDSLQVAWR
401: WQKIHPHGYN SY

Arabidopsis Description

DURPutative UDP-arabinose 4-epimerase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI17]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.