Factsheet for Zm00001d037784_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG21627	Sorghum	mitochondrion	92.82	94.17
TraesCS5B01G023700.1	Wheat	cytosol, mitochondrion, plastid	86.21	89.95
TraesCS5D01G032700.1	Wheat	cytosol, mitochondrion, plastid	85.92	89.66
KRH21867	Soybean	cytosol, mitochondrion, plastid	80.17	83.41
KRH27429	Soybean	cytosol, mitochondrion, plastid	80.03	83.26
KRH13001	Soybean	cytosol, mitochondrion, plastid	79.89	83.23
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	80.32	83.18
HORVU5Hr1G007050.2	Barley	plastid	86.35	82.9
GSMUA_Achr4P02550_001	Banana	mitochondrion	54.31	82.89
KRH43408	Soybean	nucleus	79.17	82.48
VIT_19s0014g00290.t01	Wine grape	cytosol, mitochondrion, plastid	79.89	82.37
Zm00001d028654_P002	Maize	cytosol	79.17	81.99
Solyc07g062130.2.1	Tomato	extracellular, unclear	79.02	81.6
PGSC0003DMT400018192	Potato	cytosol, mitochondrion, plastid	77.87	80.42
Zm00001d017601_P001	Maize	extracellular, peroxisome	33.48	75.9
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	69.68	73.48
KRH46062	Soybean	cytosol	63.65	72.39
CDX81794	Canola	plastid	32.47	65.13
Zm00001d029151_P002	Maize	extracellular, golgi	12.07	23.66
Zm00001d021249_P003	Maize	cytosol	11.93	22.86
Zm00001d005598_P001	Maize	plastid	11.78	22.47
Zm00001d020093_P002	Maize	golgi	9.63	22.19
Zm00001d037087_P001	Maize	endoplasmic reticulum	13.65	21.59
Zm00001d045078_P001	Maize	extracellular, golgi	12.79	21.55
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	13.36	20.67
Zm00001d018350_P001	Maize	plasma membrane	12.93	20.5
Zm00001d049804_P001	Maize	plasma membrane	12.93	20.09
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	12.07	19.86
Zm00001d028825_P001	Maize	golgi, mitochondrion	11.78	19.43
Zm00001d047915_P001	Maize	plastid	13.36	19.42
Zm00001d028427_P001	Maize	plastid	13.07	19.0
Zm00001d047683_P003	Maize	mitochondrion	11.49	18.87
Zm00001d021026_P001	Maize	endoplasmic reticulum	12.79	18.28
Zm00001d034293_P001	Maize	plastid	5.32	16.74
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	11.35	15.64
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	9.63	14.73
Zm00001d037310_P001	Maize	plastid	5.89	13.49
Zm00001d014509_P001	Maize	cytosol	5.17	12.54
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	6.18	12.43
Zm00001d017999_P002	Maize	mitochondrion	5.46	12.22
Zm00001d017794_P001	Maize	plastid	5.89	10.99
Zm00001d038116_P001	Maize	plastid	5.03	10.8

Protein Annotations

EnsemblPlants:Zm00001d037784_P002	EnsemblPlants:Zm00001d037784_T002	EnsemblPlantsGene:Zm00001d037784	EntrezGene:100191391	Gene3D:3.40.50.720	Gene3D:3.90.25.10
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0050662	InterPro:Epimerase_deHydtase	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43000	PANTHER:PTHR43000:SF15	PFAM:PF01370	PFAM:PF16363	ProteinID:AQK84801.1
SUPFAM:SSF51735	UniParc:UPI000842AC58	UniProt:A0A1D6M0H1	MapMan:3.13.6.1	:	:

Description

salmon silks1 salmon silks1

Coordinates

chr6:+:137680643..137684176

Molecular Weight (calculated)

78439.3 Da

IEP (calculated)

6.852

GRAVY (calculated)

-0.260

Length

696 amino acids

Sequence
(BLAST)

001: MLHQILVIFL QKDSILCVGI LDSKSNHTGA MARPYKPKNI LITGAAGFIA SHVAIRITKK YPDYKIIVLD KLDYCSNLKN LLPVSSSPNF KFVKGDIASV
101: DLVNFLLVTE NIDTIMHFAA QTHVDNSFGN SFEFTKNNIY GTHVLLEACR ISGQIKRFIH VSTDEVYGET DEDAVVGNHE ASQLLPTNPY AATKAGAEML
201: VMAYGRSYGL PVITTRGNNV YGPNQFPEKL IPKFILLAMR GEPLPIHGDG VNVRSYLYCE DVAEAFEVIL HHGEVGHVYN IGTKRERTVL DVAKDVCRLF
301: NLEPDKVIMF VENRPFNDQR YFLDDEKLKS LGWAERTPWE EGLKKTMEWY VANSDYWGDV SGALLPHPRT LMMPGCEGSE EIKGILSRFN NIQTKVGSTS
401: DNAPEPHAFK FLIYGRTGWI GGLLGKICEK KGIPYEYGNG RLQERSSLVL DIQTIKPTHV FNAAGVTGRP NVDWCESHKP DTIRTNVVGT LNLADVCRKH
501: GLLMMNYATG CIFEYDAHHP EGSGIGFKEE DTPNFTGSFY SKTKAMVEEL LKEYENVCTL RVRMPISSDL SNPRNFVTKI SRYNKVVNIP NSMTILDELL
601: PISVEMAKRN LRGIYNFTNP GVVSHNEILE MYKQYIDPSF KWTNFTLEEQ AKVIVAPRSN NEMDATKLKN EFPELLSIKD SLIKYVFEPN RKVPTD

Best Arabidopsis Sequence Match ( AT1G53500.1 )
(BLAST)

001: MDDTTYKPKN ILITGAAGFI ASHVANRLIR NYPDYKIVVL DKLDYCSDLK NLDPSFSSPN FKFVKGDIAS DDLVNYLLIT ENIDTIMHFA AQTHVDNSFG
101: NSFEFTKNNI YGTHVLLEAC KVTGQIRRFI HVSTDEVYGE TDEDAAVGNH EASQLLPTNP YSATKAGAEM LVMAYGRSYG LPVITTRGNN VYGPNQFPEK
201: MIPKFILLAM SGKPLPIHGD GSNVRSYLYC EDVAEAFEVV LHKGEIGHVY NVGTKRERRV IDVARDICKL FGKDPESSIQ FVENRPFNDQ RYFLDDQKLK
301: KLGWQERTNW EDGLKKTMDW YTQNPEWWGD VSGALLPHPR MLMMPGGRLS DGSSEKKDVS SNTVQTFTVV TPKNGDSGDK ASLKFLIYGK TGWLGGLLGK
401: LCEKQGITYE YGKGRLEDRA SLVADIRSIK PTHVFNAAGL TGRPNVDWCE SHKPETIRVN VAGTLTLADV CRENDLLMMN FATGCIFEYD ATHPEGSGIG
501: FKEEDKPNFF GSFYSKTKAM VEELLREFDN VCTLRVRMPI SSDLNNPRNF ITKISRYNKV VDIPNSMTVL DELLPISIEM AKRNLRGIWN FTNPGVVSHN
601: EILEMYKNYI EPGFKWSNFT VEEQAKVIVA ARSNNEMDGS KLSKEFPEML SIKESLLKYV FEPNKRT

Arabidopsis Description

RHM2RHM2 [Source:UniProtKB/TrEMBL;Acc:A0A178W591]
SUBAcon: [peroxisome,extracellular,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.