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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 5
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P03840_001 Banana cytosol 50.88 75.82
GSMUA_Achr5P10430_001 Banana cytosol 50.66 75.49
GSMUA_Achr4P29070_001 Banana cytosol 10.31 71.21
GSMUA_Achr3P31810_001 Banana cytosol, mitochondrion, peroxisome 89.47 65.7
Solyc10g007480.2.1 Tomato nucleus 80.92 62.54
GSMUA_Achr4P10430_001 Banana cytosol, extracellular, mitochondrion 88.38 62.1
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 86.18 61.79
VIT_19s0014g00290.t01 Wine grape cytosol, mitochondrion, plastid 85.53 57.78
KRH21867 Soybean cytosol, mitochondrion, plastid 84.65 57.7
GSMUA_Achr3P31820_001 Banana cytosol, mitochondrion, plastid 76.54 57.69
TraesCS5B01G023700.1 Wheat cytosol, mitochondrion, plastid 84.21 57.57
KRH27429 Soybean cytosol, mitochondrion, plastid 84.43 57.55
TraesCS5D01G032700.1 Wheat cytosol, mitochondrion, plastid 83.99 57.42
KRH13001 Soybean cytosol, mitochondrion, plastid 83.55 57.04
GSMUA_Achr4P29060_001 Banana cytosol 27.19 56.62
KRH43408 Soybean nucleus 82.68 56.44
PGSC0003DMT400054754 Potato cytosol, mitochondrion, plastid 80.92 54.75
KXG21627 Sorghum mitochondrion 81.8 54.37
Zm00001d037784_P002 Maize endoplasmic reticulum 82.89 54.31
HORVU5Hr1G007050.2 Barley plastid 83.77 52.69
CDX81794 Canola plastid 39.91 52.45
KRG98907 Soybean cytosol, mitochondrion, peroxisome 69.96 48.33
KRH46062 Soybean cytosol 60.09 44.77
GSMUA_Achr5P25290_001 Banana mitochondrion 2.85 11.21
GSMUA_Achr4P02670_001 Banana golgi 7.24 9.46
GSMUA_Achr9P00170_001 Banana extracellular, golgi 7.02 9.17
GSMUA_Achr5P13620_001 Banana cytosol 7.02 9.12
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 6.8 8.88
GSMUA_Achr5P09200_001 Banana golgi 6.8 8.73
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, golgi 7.24 8.15
GSMUA_Achr4P02040_001 Banana endoplasmic reticulum 7.02 7.92
GSMUA_Achr1P18740_001 Banana cytosol 6.14 7.91
GSMUA_Achr8P08790_001 Banana endoplasmic reticulum, nucleus, peroxisome 7.46 7.66
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 7.02 7.55
GSMUA_AchrUn_... Banana endoplasmic reticulum 7.24 7.45
GSMUA_Achr3P16370_001 Banana golgi, mitochondrion, plastid 7.02 7.39
GSMUA_Achr9P13500_001 Banana cytosol, endoplasmic reticulum, golgi, plastid 6.58 7.23
GSMUA_Achr4P17900_001 Banana endoplasmic reticulum, mitochondrion, peroxisome 6.58 6.98
GSMUA_Achr7P02740_001 Banana endoplasmic reticulum 7.24 6.8
GSMUA_Achr8P00950_001 Banana cytosol, endoplasmic reticulum, golgi 6.58 6.77
GSMUA_Achr3P04850_001 Banana endoplasmic reticulum 6.14 6.76
GSMUA_Achr5P18760_001 Banana endoplasmic reticulum, golgi, mitochondrion 6.58 6.54
GSMUA_Achr3P23390_001 Banana mitochondrion 5.92 6.47
GSMUA_Achr11P... Banana cytosol, golgi 5.48 6.39
GSMUA_Achr7P16250_001 Banana cytosol, endoplasmic reticulum, golgi 7.02 6.26
GSMUA_Achr8P33320_001 Banana mitochondrion 5.7 6.24
GSMUA_Achr9P06140_001 Banana plastid 7.02 6.14
GSMUA_Achr11P... Banana mitochondrion 5.48 6.0
GSMUA_Achr4P31860_001 Banana mitochondrion 5.26 5.77
GSMUA_Achr6P26620_001 Banana plastid 6.58 5.59
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi, nucleus 4.39 5.19
GSMUA_Achr5P04690_001 Banana endoplasmic reticulum, golgi, nucleus 4.17 4.11
Protein Annotations
EnsemblPlants:GSMUA_Achr4P02550_001EnsemblPlants:GSMUA_Achr4T02550_001EnsemblPlantsGene:GSMUA_Achr4G02550_001Gene3D:3.40.50.720Gene3D:3.90.25.10GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0050662InterPro:Epimerase_deHydtaseInterPro:NAD(P)-bd_dom_sfInterPro:RmlD-like-bd
PANTHER:PTHR43000PANTHER:PTHR43000:SF15PFAM:PF01370PFAM:PF04321SUPFAM:SSF51735UniParc:UPI0002960960
UniProt:M0SKH2MapMan:3.13.6.1::::
Description
Probable rhamnose biosynthetic enzyme 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02550_001]
Coordinates
chr4:-:2203808..2206113
Molecular Weight (calculated)
52083.7 Da
IEP (calculated)
8.514
GRAVY (calculated)
-0.432
Length
456 amino acids
Sequence
(BLAST)
001: MLVMAYGRSY GLPVITTRGN NVYGPNQFPE KLIPKFILLA MRGHPLPIHG DGSNVRSYLV IEFVENRPFN DQRYFLDDQK LKNIGWSERT TWEEGLKKTM
101: EWYTSNPDWW GDVSGALLPH PRMLMMPGIE RHVDGAEETK VTVSQSANSN SQKRMVVPTP RTSSKKPHLK FLIYGKTGWI GGLLGVICEK QGIPYEYGRG
201: RLEERSQLIL DIQNVKPSHV FNAAGVTGRP NVDWCESHKQ ETIRTNVVGT LTLADVCREH GLLLMNYATG CIFEYDTEHL EGSGIGFKEE DKPNFTGSFY
301: SKTKAMVEEL LKEYENVCTL RVRMPISSDL SNPRNFITKI TRYNKVVNIP NSMTVLDELL PISIEMAKRN CRGIWNFTNP GAVSHNEILE MYKSYIDPSF
401: KWVNFTLEEQ AKVIVAPRSN NEMDATKLKR EFPELLSIKD SLIKYVFEPN KKVLSN
Best Arabidopsis Sequence Match ( AT1G78570.1 )
(BLAST)
001: MASYTPKNIL ITGAAGFIAS HVANRLIRSY PDYKIVVLDK LDYCSNLKNL NPSKHSPNFK FVKGDIASAD LVNHLLITEG IDTIMHFAAQ THVDNSFGNS
101: FEFTKNNIYG THVLLEACKV TGQIRRFIHV STDEVYGETD EDALVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP VITTRGNNVY GPNQFPEKLI
201: PKFILLAMRG QVLPIHGDGS NVRSYLYCED VAEAFEVVLH KGEVGHVYNI GTKKERRVND VAKDICKLFN MDPEANIKFV DNRPFNDQRY FLDDQKLKKL
301: GWSERTTWEE GLKKTMDWYT QNPEWWGDVS GALLPHPRML MMPGGRHFDG SEDNSLAATL SEKPSQTHMV VPSQRSNGTP QKPSLKFLIY GKTGWIGGLL
401: GKICDKQGIA YEYGKGRLED RSSLLQDIQS VKPTHVFNSA GVTGRPNVDW CESHKTETIR ANVAGTLTLA DVCREHGLLM MNFATGCIFE YDDKHPEGSG
501: IGFKEEDTPN FTGSFYSKTK AMVEELLKEY DNVCTLRVRM PISSDLNNPR NFITKISRYN KVVNIPNSMT VLDELLPISI EMAKRNLKGI WNFTNPGVVS
601: HNEILEMYRD YINPEFKWAN FTLEEQAKVI VAPRSNNEMD ASKLKKEFPE LLSIKESLIK YAYGPNKKT
Arabidopsis Description
RHM1Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM5]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.