Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
- golgi 1
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr1P03840_001 | Banana | cytosol | 50.88 | 75.82 |
GSMUA_Achr5P10430_001 | Banana | cytosol | 50.66 | 75.49 |
GSMUA_Achr4P29070_001 | Banana | cytosol | 10.31 | 71.21 |
GSMUA_Achr3P31810_001 | Banana | cytosol, mitochondrion, peroxisome | 89.47 | 65.7 |
Solyc10g007480.2.1 | Tomato | nucleus | 80.92 | 62.54 |
GSMUA_Achr4P10430_001 | Banana | cytosol, extracellular, mitochondrion | 88.38 | 62.1 |
GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 86.18 | 61.79 |
VIT_19s0014g00290.t01 | Wine grape | cytosol, mitochondrion, plastid | 85.53 | 57.78 |
KRH21867 | Soybean | cytosol, mitochondrion, plastid | 84.65 | 57.7 |
GSMUA_Achr3P31820_001 | Banana | cytosol, mitochondrion, plastid | 76.54 | 57.69 |
TraesCS5B01G023700.1 | Wheat | cytosol, mitochondrion, plastid | 84.21 | 57.57 |
KRH27429 | Soybean | cytosol, mitochondrion, plastid | 84.43 | 57.55 |
TraesCS5D01G032700.1 | Wheat | cytosol, mitochondrion, plastid | 83.99 | 57.42 |
KRH13001 | Soybean | cytosol, mitochondrion, plastid | 83.55 | 57.04 |
GSMUA_Achr4P29060_001 | Banana | cytosol | 27.19 | 56.62 |
KRH43408 | Soybean | nucleus | 82.68 | 56.44 |
PGSC0003DMT400054754 | Potato | cytosol, mitochondrion, plastid | 80.92 | 54.75 |
KXG21627 | Sorghum | mitochondrion | 81.8 | 54.37 |
Zm00001d037784_P002 | Maize | endoplasmic reticulum | 82.89 | 54.31 |
HORVU5Hr1G007050.2 | Barley | plastid | 83.77 | 52.69 |
CDX81794 | Canola | plastid | 39.91 | 52.45 |
KRG98907 | Soybean | cytosol, mitochondrion, peroxisome | 69.96 | 48.33 |
KRH46062 | Soybean | cytosol | 60.09 | 44.77 |
GSMUA_Achr5P25290_001 | Banana | mitochondrion | 2.85 | 11.21 |
GSMUA_Achr4P02670_001 | Banana | golgi | 7.24 | 9.46 |
GSMUA_Achr9P00170_001 | Banana | extracellular, golgi | 7.02 | 9.17 |
GSMUA_Achr5P13620_001 | Banana | cytosol | 7.02 | 9.12 |
GSMUA_Achr6P22620_001 | Banana | golgi, mitochondrion | 6.8 | 8.88 |
GSMUA_Achr5P09200_001 | Banana | golgi | 6.8 | 8.73 |
GSMUA_Achr10P... | Banana | cytosol, endoplasmic reticulum, golgi | 7.24 | 8.15 |
GSMUA_Achr4P02040_001 | Banana | endoplasmic reticulum | 7.02 | 7.92 |
GSMUA_Achr1P18740_001 | Banana | cytosol | 6.14 | 7.91 |
GSMUA_Achr8P08790_001 | Banana | endoplasmic reticulum, nucleus, peroxisome | 7.46 | 7.66 |
GSMUA_Achr8P27530_001 | Banana | cytosol, golgi, plastid | 7.02 | 7.55 |
GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 7.24 | 7.45 |
GSMUA_Achr3P16370_001 | Banana | golgi, mitochondrion, plastid | 7.02 | 7.39 |
GSMUA_Achr9P13500_001 | Banana | cytosol, endoplasmic reticulum, golgi, plastid | 6.58 | 7.23 |
GSMUA_Achr4P17900_001 | Banana | endoplasmic reticulum, mitochondrion, peroxisome | 6.58 | 6.98 |
GSMUA_Achr7P02740_001 | Banana | endoplasmic reticulum | 7.24 | 6.8 |
GSMUA_Achr8P00950_001 | Banana | cytosol, endoplasmic reticulum, golgi | 6.58 | 6.77 |
GSMUA_Achr3P04850_001 | Banana | endoplasmic reticulum | 6.14 | 6.76 |
GSMUA_Achr5P18760_001 | Banana | endoplasmic reticulum, golgi, mitochondrion | 6.58 | 6.54 |
GSMUA_Achr3P23390_001 | Banana | mitochondrion | 5.92 | 6.47 |
GSMUA_Achr11P... | Banana | cytosol, golgi | 5.48 | 6.39 |
GSMUA_Achr7P16250_001 | Banana | cytosol, endoplasmic reticulum, golgi | 7.02 | 6.26 |
GSMUA_Achr8P33320_001 | Banana | mitochondrion | 5.7 | 6.24 |
GSMUA_Achr9P06140_001 | Banana | plastid | 7.02 | 6.14 |
GSMUA_Achr11P... | Banana | mitochondrion | 5.48 | 6.0 |
GSMUA_Achr4P31860_001 | Banana | mitochondrion | 5.26 | 5.77 |
GSMUA_Achr6P26620_001 | Banana | plastid | 6.58 | 5.59 |
GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, nucleus | 4.39 | 5.19 |
GSMUA_Achr5P04690_001 | Banana | endoplasmic reticulum, golgi, nucleus | 4.17 | 4.11 |
Protein Annotations
EnsemblPlants:GSMUA_Achr4P02550_001 | EnsemblPlants:GSMUA_Achr4T02550_001 | EnsemblPlantsGene:GSMUA_Achr4G02550_001 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0050662 | InterPro:Epimerase_deHydtase | InterPro:NAD(P)-bd_dom_sf | InterPro:RmlD-like-bd |
PANTHER:PTHR43000 | PANTHER:PTHR43000:SF15 | PFAM:PF01370 | PFAM:PF04321 | SUPFAM:SSF51735 | UniParc:UPI0002960960 |
UniProt:M0SKH2 | MapMan:3.13.6.1 | : | : | : | : |
Description
Probable rhamnose biosynthetic enzyme 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02550_001]
Coordinates
chr4:-:2203808..2206113
Molecular Weight (calculated)
52083.7 Da
IEP (calculated)
8.514
GRAVY (calculated)
-0.432
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVMAYGRSY GLPVITTRGN NVYGPNQFPE KLIPKFILLA MRGHPLPIHG DGSNVRSYLV IEFVENRPFN DQRYFLDDQK LKNIGWSERT TWEEGLKKTM
101: EWYTSNPDWW GDVSGALLPH PRMLMMPGIE RHVDGAEETK VTVSQSANSN SQKRMVVPTP RTSSKKPHLK FLIYGKTGWI GGLLGVICEK QGIPYEYGRG
201: RLEERSQLIL DIQNVKPSHV FNAAGVTGRP NVDWCESHKQ ETIRTNVVGT LTLADVCREH GLLLMNYATG CIFEYDTEHL EGSGIGFKEE DKPNFTGSFY
301: SKTKAMVEEL LKEYENVCTL RVRMPISSDL SNPRNFITKI TRYNKVVNIP NSMTVLDELL PISIEMAKRN CRGIWNFTNP GAVSHNEILE MYKSYIDPSF
401: KWVNFTLEEQ AKVIVAPRSN NEMDATKLKR EFPELLSIKD SLIKYVFEPN KKVLSN
101: EWYTSNPDWW GDVSGALLPH PRMLMMPGIE RHVDGAEETK VTVSQSANSN SQKRMVVPTP RTSSKKPHLK FLIYGKTGWI GGLLGVICEK QGIPYEYGRG
201: RLEERSQLIL DIQNVKPSHV FNAAGVTGRP NVDWCESHKQ ETIRTNVVGT LTLADVCREH GLLLMNYATG CIFEYDTEHL EGSGIGFKEE DKPNFTGSFY
301: SKTKAMVEEL LKEYENVCTL RVRMPISSDL SNPRNFITKI TRYNKVVNIP NSMTVLDELL PISIEMAKRN CRGIWNFTNP GAVSHNEILE MYKSYIDPSF
401: KWVNFTLEEQ AKVIVAPRSN NEMDATKLKR EFPELLSIKD SLIKYVFEPN KKVLSN
001: MASYTPKNIL ITGAAGFIAS HVANRLIRSY PDYKIVVLDK LDYCSNLKNL NPSKHSPNFK FVKGDIASAD LVNHLLITEG IDTIMHFAAQ THVDNSFGNS
101: FEFTKNNIYG THVLLEACKV TGQIRRFIHV STDEVYGETD EDALVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP VITTRGNNVY GPNQFPEKLI
201: PKFILLAMRG QVLPIHGDGS NVRSYLYCED VAEAFEVVLH KGEVGHVYNI GTKKERRVND VAKDICKLFN MDPEANIKFV DNRPFNDQRY FLDDQKLKKL
301: GWSERTTWEE GLKKTMDWYT QNPEWWGDVS GALLPHPRML MMPGGRHFDG SEDNSLAATL SEKPSQTHMV VPSQRSNGTP QKPSLKFLIY GKTGWIGGLL
401: GKICDKQGIA YEYGKGRLED RSSLLQDIQS VKPTHVFNSA GVTGRPNVDW CESHKTETIR ANVAGTLTLA DVCREHGLLM MNFATGCIFE YDDKHPEGSG
501: IGFKEEDTPN FTGSFYSKTK AMVEELLKEY DNVCTLRVRM PISSDLNNPR NFITKISRYN KVVNIPNSMT VLDELLPISI EMAKRNLKGI WNFTNPGVVS
601: HNEILEMYRD YINPEFKWAN FTLEEQAKVI VAPRSNNEMD ASKLKKEFPE LLSIKESLIK YAYGPNKKT
101: FEFTKNNIYG THVLLEACKV TGQIRRFIHV STDEVYGETD EDALVGNHEA SQLLPTNPYS ATKAGAEMLV MAYGRSYGLP VITTRGNNVY GPNQFPEKLI
201: PKFILLAMRG QVLPIHGDGS NVRSYLYCED VAEAFEVVLH KGEVGHVYNI GTKKERRVND VAKDICKLFN MDPEANIKFV DNRPFNDQRY FLDDQKLKKL
301: GWSERTTWEE GLKKTMDWYT QNPEWWGDVS GALLPHPRML MMPGGRHFDG SEDNSLAATL SEKPSQTHMV VPSQRSNGTP QKPSLKFLIY GKTGWIGGLL
401: GKICDKQGIA YEYGKGRLED RSSLLQDIQS VKPTHVFNSA GVTGRPNVDW CESHKTETIR ANVAGTLTLA DVCREHGLLM MNFATGCIFE YDDKHPEGSG
501: IGFKEEDTPN FTGSFYSKTK AMVEELLKEY DNVCTLRVRM PISSDLNNPR NFITKISRYN KVVNIPNSMT VLDELLPISI EMAKRNLKGI WNFTNPGVVS
601: HNEILEMYRD YINPEFKWAN FTLEEQAKVI VAPRSNNEMD ASKLKKEFPE LLSIKESLIK YAYGPNKKT
Arabidopsis Description
RHM1Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYM5]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.