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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 3
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:golgi
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr1P18740_001
GSMUA_Achr5P13620_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12780.1 GSMUA_Achr1P18740_001 AT1G12780.1 21798944
AT1G12780.1 GSMUA_Achr5P13620_001 AT1G12780.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P13620_001 Banana cytosol 81.36 82.05
KRH59827 Soybean extracellular, golgi 80.23 81.14
VIT_02s0025g04210.t01 Wine grape cytosol 79.94 80.86
AT1G12780.1 Thale cress cytoskeleton, cytosol, peroxisome 79.66 80.34
KRH41129 Soybean nucleus 79.38 80.29
Bra016757.1-P Field mustard cytosol 79.1 79.77
CDY21065 Canola cytosol 78.81 79.49
CDY31278 Canola cytosol 78.81 79.49
CDY47346 Canola cytosol 77.4 78.06
CDY49193 Canola cytosol 77.12 77.78
Solyc08g080570.2.1 Tomato cytosol 77.12 77.78
PGSC0003DMT400007898 Potato cytosol 76.84 77.49
CDY69000 Canola cytosol 73.16 77.31
Bra027626.1-P Field mustard cytosol 76.55 77.21
Bra019785.1-P Field mustard cytosol 72.88 77.01
KRH51264 Soybean plastid 76.27 76.92
AT1G63180.1 Thale cress cytosol 75.99 76.64
Bra039253.1-P Field mustard cytosol 73.16 74.64
KRH00406 Soybean cytosol, mitochondrion, nucleus 14.41 73.91
KRG99450 Soybean cytosol, mitochondrion, nucleus 14.12 72.46
KXG36042 Sorghum cytosol 74.01 71.98
Zm00001d021249_P003 Maize cytosol 73.73 71.9
TraesCS5A01G314800.1 Wheat cytosol 71.47 68.75
TraesCS5B01G315700.1 Wheat cytosol 71.19 68.48
TraesCS5D01G321100.1 Wheat cytosol 71.19 68.29
GSMUA_Achr9P00170_001 Banana extracellular, golgi 66.67 67.62
GSMUA_Achr6P22620_001 Banana golgi, mitochondrion 66.67 67.62
Os09t0526700-01 Rice cytosol 71.19 67.56
GSMUA_Achr4P02670_001 Banana golgi 66.38 67.34
GSMUA_Achr5P09200_001 Banana golgi 67.51 67.32
HORVU5Hr1G080860.10 Barley mitochondrion 70.9 59.2
GSMUA_Achr8P27530_001 Banana cytosol, golgi, plastid 67.51 56.37
GSMUA_Achr3P16370_001 Banana golgi, mitochondrion, plastid 67.23 54.97
GSMUA_Achr9P06140_001 Banana plastid 67.8 46.07
CDY60264 Canola plastid 79.38 45.99
GSMUA_Achr6P26620_001 Banana plastid 68.64 45.25
GSMUA_Achr11P... Banana cytosol, golgi 38.7 35.04
GSMUA_Achr8P33320_001 Banana mitochondrion 38.7 32.85
GSMUA_Achr11P... Banana mitochondrion 38.42 32.61
GSMUA_Achr3P23390_001 Banana mitochondrion 38.42 32.61
GSMUA_Achr4P31860_001 Banana mitochondrion 37.85 32.21
GSMUA_Achr10P... Banana cytosol, endoplasmic reticulum, golgi 24.58 21.48
GSMUA_Achr3P04850_001 Banana endoplasmic reticulum 24.29 20.77
GSMUA_Achr9P13500_001 Banana cytosol, endoplasmic reticulum, golgi, plastid 23.73 20.24
GSMUA_Achr4P02040_001 Banana endoplasmic reticulum 22.88 20.05
GSMUA_Achr4P17900_001 Banana endoplasmic reticulum, mitochondrion, peroxisome 24.29 20.0
GSMUA_Achr5P18760_001 Banana endoplasmic reticulum, golgi, mitochondrion 25.42 19.61
GSMUA_AchrUn_... Banana endoplasmic reticulum 23.16 18.51
GSMUA_Achr8P00950_001 Banana cytosol, endoplasmic reticulum, golgi 23.16 18.51
GSMUA_Achr11P... Banana endoplasmic reticulum, golgi, nucleus 20.06 18.44
GSMUA_Achr8P08790_001 Banana endoplasmic reticulum, nucleus, peroxisome 22.6 18.02
GSMUA_Achr7P02740_001 Banana endoplasmic reticulum 23.45 17.11
GSMUA_Achr7P16250_001 Banana cytosol, endoplasmic reticulum, golgi 24.01 16.63
GSMUA_Achr5P25290_001 Banana mitochondrion 5.08 15.52
GSMUA_Achr5P04690_001 Banana endoplasmic reticulum, golgi, nucleus 16.38 12.55
GSMUA_Achr4P10430_001 Banana cytosol, extracellular, mitochondrion 22.03 12.02
GSMUA_Achr10P... Banana cytosol, mitochondrion, plastid 19.49 10.85
GSMUA_Achr3P31810_001 Banana cytosol, mitochondrion, peroxisome 18.64 10.63
GSMUA_Achr3P31820_001 Banana cytosol, mitochondrion, plastid 18.08 10.58
GSMUA_Achr4P29070_001 Banana cytosol 1.69 9.09
GSMUA_Achr4P02550_001 Banana mitochondrion 7.91 6.14
GSMUA_Achr4P29060_001 Banana cytosol 2.54 4.11
GSMUA_Achr5P10430_001 Banana cytosol 3.11 3.59
GSMUA_Achr1P03840_001 Banana cytosol 2.54 2.94
Protein Annotations
KEGG:00052+5.1.3.2KEGG:00520+5.1.3.2MapMan:3.13.8Gene3D:3.40.50.720Gene3D:3.90.25.10GO:GO:0003674
GO:GO:0003824GO:GO:0003978GO:GO:0005975GO:GO:0006012GO:GO:0008150GO:GO:0008152
GO:GO:0016853EnsemblPlantsGene:GSMUA_Achr1G18740_001EnsemblPlants:GSMUA_Achr1P18740_001EnsemblPlants:GSMUA_Achr1T18740_001UniProt:M0S132InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sfPFAM:PF16363PANTHER:PTHR43725PANTHER:PTHR43725:SF9SUPFAM:SSF51735TIGRFAMs:TIGR01179
InterPro:UDP_G4EUniParc:UPI000296AA2D::::
Description
UDP-glucose 4-epimerase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G18740_001]
Coordinates
chr1:+:14006766..14010422
Molecular Weight (calculated)
39402.1 Da
IEP (calculated)
6.785
GRAVY (calculated)
-0.294
Length
354 amino acids
Sequence
(BLAST)
001: MEQSQQRQRS VLVTGGAGFI GTHTVLQLLK EGFLVTIIDN LDNSVPDAVD RVRLLAGPKL SQNLRFFIGD LRNNEDLEKV FSDTKYDAVI HFAGLKAVGE
101: SVAKPSLYYN NNLIGTINLY EHMAKYGCKK VVFSSSATVY GQPEKIPCVE DFEPRAMNPY GRTKLFLEEI ARDIQKADPE WRIILLRYFN PVGAHESGQI
201: GEDPIGIPNN LMPYIQQVAV GRLPELNVYG YDYPTKDGSA IRDYIHVMDL ADGHIAALQK LFATEDVGCV AYNLGTGYGT SVLEMVAAFE KASGKKIPVK
301: LCPRRSGDAT AVFASTERAK KELGWSAKYG VEEMCRDQWK WASNNPYGYR PPQS
Best Arabidopsis Sequence Match ( AT1G12780.1 )
(BLAST)
001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L
Arabidopsis Description
UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.