Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- golgi 4
- plastid 1
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G12780.1 | KRH41129 | AT1G12780.1 | 21798944 |
| AT1G12780.1 | KRH59827 | AT1G12780.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41129 | Soybean | nucleus | 94.86 | 94.86 |
| Bra016757.1-P | Field mustard | cytosol | 86.0 | 85.75 |
| CDY21065 | Canola | cytosol | 86.0 | 85.75 |
| CDY31278 | Canola | cytosol | 86.0 | 85.75 |
| AT1G12780.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 85.71 | 85.47 |
| VIT_02s0025g04210.t01 | Wine grape | cytosol | 84.57 | 84.57 |
| CDY47346 | Canola | cytosol | 83.71 | 83.48 |
| CDY49193 | Canola | cytosol | 83.43 | 83.19 |
| CDY69000 | Canola | cytosol | 79.43 | 82.99 |
| Bra027626.1-P | Field mustard | cytosol | 83.14 | 82.91 |
| Bra019785.1-P | Field mustard | cytosol | 79.14 | 82.69 |
| AT1G63180.1 | Thale cress | cytosol | 82.0 | 81.77 |
| KRH00406 | Soybean | cytosol, mitochondrion, nucleus | 16.0 | 81.16 |
| GSMUA_Achr1P18740_001 | Banana | cytosol | 81.14 | 80.23 |
| KRG99450 | Soybean | cytosol, mitochondrion, nucleus | 15.71 | 79.71 |
| Bra039253.1-P | Field mustard | cytosol | 78.57 | 79.25 |
| Solyc08g080570.2.1 | Tomato | cytosol | 79.14 | 78.92 |
| PGSC0003DMT400007898 | Potato | cytosol | 78.57 | 78.35 |
| KRH51264 | Soybean | plastid | 78.57 | 78.35 |
| GSMUA_Achr5P13620_001 | Banana | cytosol | 78.29 | 78.06 |
| KRH26241 | Soybean | cytosol | 11.71 | 77.36 |
| KXG36042 | Sorghum | cytosol | 74.29 | 71.43 |
| Zm00001d021249_P003 | Maize | cytosol | 73.71 | 71.07 |
| TraesCS5B01G315700.1 | Wheat | cytosol | 72.29 | 68.75 |
| TraesCS5A01G314800.1 | Wheat | cytosol | 72.0 | 68.48 |
| TraesCS5D01G321100.1 | Wheat | cytosol | 72.0 | 68.29 |
| KRH41316 | Soybean | extracellular, golgi | 65.14 | 65.14 |
| KRH60045 | Soybean | extracellular | 65.14 | 65.14 |
| Os09t0526700-01 | Rice | cytosol | 68.57 | 64.34 |
| HORVU5Hr1G080860.10 | Barley | mitochondrion | 71.43 | 58.96 |
| KRH27832 | Soybean | plastid | 65.14 | 58.76 |
| KRH77652 | Soybean | plastid | 64.57 | 57.8 |
| CDY60264 | Canola | plastid | 85.14 | 48.77 |
| KRH36892 | Soybean | golgi, mitochondrion | 40.0 | 33.73 |
| KRH11871 | Soybean | golgi, plastid | 39.71 | 33.49 |
| KRH43065 | Soybean | golgi, mitochondrion, plastid | 39.71 | 33.41 |
| KRH59194 | Soybean | golgi, mitochondrion | 38.57 | 32.45 |
| KRH40009 | Soybean | plastid | 25.71 | 22.11 |
| KRH57292 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 26.57 | 21.68 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 25.71 | 21.63 |
| KRH04016 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 26.29 | 21.4 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 26.0 | 21.11 |
| KRH02967 | Soybean | nucleus | 25.71 | 20.88 |
| KRH65316 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 25.71 | 20.55 |
| KRH76209 | Soybean | endoplasmic reticulum, plastid | 25.71 | 20.55 |
| KRH31569 | Soybean | mitochondrion | 25.71 | 19.48 |
| KRG97348 | Soybean | endoplasmic reticulum | 24.0 | 19.13 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 25.71 | 18.26 |
| KRH04933 | Soybean | cytosol, mitochondrion, plastid | 23.14 | 12.58 |
| KRH16155 | Soybean | cytosol | 23.43 | 12.52 |
| KRH46062 | Soybean | cytosol | 20.86 | 11.93 |
| KRH21867 | Soybean | cytosol, mitochondrion, plastid | 22.29 | 11.66 |
| KRH27429 | Soybean | cytosol, mitochondrion, plastid | 22.29 | 11.66 |
| KRH43408 | Soybean | nucleus | 22.0 | 11.53 |
| KRH13001 | Soybean | cytosol, mitochondrion, plastid | 22.0 | 11.53 |
| KRG98907 | Soybean | cytosol, mitochondrion, peroxisome | 21.71 | 11.52 |
| KRH57264 | Soybean | endoplasmic reticulum | 2.86 | 4.78 |
| KRH03995 | Soybean | plastid | 4.0 | 4.64 |
| KRH77471 | Soybean | cytosol, endoplasmic reticulum | 3.43 | 4.32 |
| KRH57441 | Soybean | cytosol | 2.86 | 3.22 |
Protein Annotations
| KEGG:00052+5.1.3.2 | KEGG:00520+5.1.3.2 | EntrezGene:100803483 | MapMan:3.13.8 | Gene3D:3.40.50.720 | Gene3D:3.90.25.10 |
| EMBL:ACUP02003342 | EMBL:BT094106 | UniProt:C6T9D7 | EnsemblPlantsGene:GLYMA_05G204700 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003978 | GO:GO:0005975 | GO:GO:0006012 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016853 |
| GO:GO:0016857 | EnsemblPlants:KRH59827 | ProteinID:KRH59827 | ProteinID:KRH59827.1 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf |
| InterPro:Nuc_sugar_epim | PFAM:PF16363 | PRINTS:PR01713 | PANTHER:PTHR43725 | PANTHER:PTHR43725:SF9 | MetaCyc:PWY-3821 |
| MetaCyc:PWY-6317 | MetaCyc:PWY-6397 | MetaCyc:PWY-6527 | MetaCyc:PWY-7328 | MetaCyc:PWY-7344 | SUPFAM:SSF51735 |
| TIGRFAMs:TIGR01179 | InterPro:UDP_G4E | UniParc:UPI0001B15AEE | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:38804306..38807296
Molecular Weight (calculated)
39119.8 Da
IEP (calculated)
7.895
GRAVY (calculated)
-0.310
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSSQHILV TGGAGFIGTH TVVQLLKAGF SVSIIDNFDN SVMEAVDRVR QVVGPLLSQN LQFTQGDLRN RDDLEKLFSK TTFDAVIHFA GLKAVAESVA
101: KPRRYFDFNL VGTINLYEFM AKYNCKKMVF SSSATVYGQP EKIPCEEDFK LQAMNPYGRT KLFLEEIARD IQKAEPEWKI ILLRYFNPVG AHESGKLGED
201: PKGIPNNLMP YIQQVAVGRL TELNVYGHDY PTRDGSAIRD YIHVMDLADG HIAALRKLFT TENIGCTAYN LGTGRGTSVL EMVAAFEKAS GKKIPVKLCP
301: RRPGDATEVY ASTERAEKEL GWKANYGVEE MCRDQWNWAK NNPWGYAGKP
101: KPRRYFDFNL VGTINLYEFM AKYNCKKMVF SSSATVYGQP EKIPCEEDFK LQAMNPYGRT KLFLEEIARD IQKAEPEWKI ILLRYFNPVG AHESGKLGED
201: PKGIPNNLMP YIQQVAVGRL TELNVYGHDY PTRDGSAIRD YIHVMDLADG HIAALRKLFT TENIGCTAYN LGTGRGTSVL EMVAAFEKAS GKKIPVKLCP
301: RRPGDATEVY ASTERAEKEL GWKANYGVEE MCRDQWNWAK NNPWGYAGKP
001: MGSSVEQNIL VTGGAGFIGT HTVVQLLKDG FKVSIIDNFD NSVIEAVDRV RELVGPDLSK KLDFNLGDLR NKGDIEKLFS KQRFDAVIHF AGLKAVGESV
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L
101: ENPRRYFDNN LVGTINLYET MAKYNCKMMV FSSSATVYGQ PEKIPCMEDF ELKAMNPYGR TKLFLEEIAR DIQKAEPEWR IILLRYFNPV GAHESGSIGE
201: DPKGIPNNLM PYIQQVAVGR LPELNVYGHD YPTEDGSAVR DYIHVMDLAD GHIAALRKLF ADPKIGCTAY NLGTGQGTSV LEMVAAFEKA SGKKIPIKLC
301: PRRSGDATAV YASTEKAEKE LGWKAKYGVD EMCRDQWKWA NNNPWGYQNK L
Arabidopsis Description
UGE1Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q42605]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
SUBAcon: [peroxisome,cytoskeleton,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.