Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- golgi 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57264 | Soybean | endoplasmic reticulum | 64.24 | 92.82 |
| KRH77471 | Soybean | cytosol, endoplasmic reticulum | 76.82 | 83.45 |
| KRH57441 | Soybean | cytosol | 61.26 | 59.49 |
| KRH13001 | Soybean | cytosol, mitochondrion, plastid | 80.13 | 36.23 |
| KRH43408 | Soybean | nucleus | 80.13 | 36.23 |
| KRH21867 | Soybean | cytosol, mitochondrion, plastid | 79.47 | 35.87 |
| KRH04933 | Soybean | cytosol, mitochondrion, plastid | 76.49 | 35.87 |
| KRH27429 | Soybean | cytosol, mitochondrion, plastid | 78.81 | 35.58 |
| KRH16155 | Soybean | cytosol | 76.82 | 35.42 |
| KRG98907 | Soybean | cytosol, mitochondrion, peroxisome | 58.94 | 26.97 |
| KRH46062 | Soybean | cytosol | 51.99 | 25.65 |
| KRH26241 | Soybean | cytosol | 4.3 | 24.53 |
| KRG99450 | Soybean | cytosol, mitochondrion, nucleus | 4.3 | 18.84 |
| KRH00406 | Soybean | cytosol, mitochondrion, nucleus | 4.3 | 18.84 |
| KRH41316 | Soybean | extracellular, golgi | 5.3 | 4.57 |
| KRH60045 | Soybean | extracellular | 5.3 | 4.57 |
| KRH27832 | Soybean | plastid | 5.63 | 4.38 |
| KRH41129 | Soybean | nucleus | 4.97 | 4.29 |
| KRH51264 | Soybean | plastid | 4.97 | 4.27 |
| KRH77652 | Soybean | plastid | 5.3 | 4.09 |
| KRH59827 | Soybean | extracellular, golgi | 4.64 | 4.0 |
| KRH11871 | Soybean | golgi, plastid | 5.3 | 3.86 |
| KRH36892 | Soybean | golgi, mitochondrion | 4.97 | 3.61 |
| KRH43065 | Soybean | golgi, mitochondrion, plastid | 4.97 | 3.61 |
| KRH58854 | Soybean | endoplasmic reticulum, golgi | 4.97 | 3.61 |
| KRH57292 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 4.97 | 3.5 |
| KRH04016 | Soybean | endoplasmic reticulum, golgi, mitochondrion, plastid | 4.97 | 3.49 |
| KRG97348 | Soybean | endoplasmic reticulum | 4.97 | 3.42 |
| KRH59194 | Soybean | golgi, mitochondrion | 4.64 | 3.37 |
| KRH72376 | Soybean | endoplasmic reticulum, mitochondrion | 4.64 | 3.25 |
| KRH02967 | Soybean | nucleus | 4.64 | 3.25 |
| KRH42756 | Soybean | extracellular, golgi, plastid | 4.97 | 3.04 |
| KRH65316 | Soybean | cytosol, endoplasmic reticulum, golgi, plastid | 4.3 | 2.97 |
| KRH76209 | Soybean | endoplasmic reticulum, plastid | 4.3 | 2.97 |
| KRH40009 | Soybean | plastid | 3.97 | 2.95 |
| KRH31569 | Soybean | mitochondrion | 4.3 | 2.81 |
Protein Annotations
| EMBL:ACUP02010371 | EnsemblPlants:KRH03995 | EnsemblPlantsGene:GLYMA_17G132500 | EntrezGene:100781643 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf |
| InterPro:RmlD-like-bd | PANTHER:PTHR10366 | PANTHER:PTHR10366:SF405 | PFAM:PF04321 | ProteinID:KRH03995 | ProteinID:KRH03995.1 |
| SUPFAM:SSF51735 | UniParc:UPI000233E7E1 | UniProt:I1MUS3 | MapMan:3.13.6.1 | : | : |
Description
hypothetical protein
Coordinates
chr17:-:10654568..10655892
Molecular Weight (calculated)
33715.4 Da
IEP (calculated)
6.513
GRAVY (calculated)
-0.192
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFPANGASA AQPLNFLIYG RTGWIGGLLG SLCRAQGISF HYGSGRLENR ASLETDIALL KPSHVFNAAG VTGRPNVDWC ESHKVETIRT NVVGTLTLAD
101: VCRDHGLILI NYATGCIFEY DSDHPLGSGI GFKETDSPNF TGSFYSKTKA MVEDLLKNYD NVCTLRVRMP ISSDLLNPRN FITKITRYEK VVDIPNSMTI
201: LDELLPISIE MGKRNLTGIW NFTNPGVVSH NEILEMYRDY VDPNFTWNNF TLEEQAKVIV APRSNNELDA AKLKKEFPEL LSIKDSLIKY VFEPNQKVKA
301: QV
101: VCRDHGLILI NYATGCIFEY DSDHPLGSGI GFKETDSPNF TGSFYSKTKA MVEDLLKNYD NVCTLRVRMP ISSDLLNPRN FITKITRYEK VVDIPNSMTI
201: LDELLPISIE MGKRNLTGIW NFTNPGVVSH NEILEMYRDY VDPNFTWNNF TLEEQAKVIV APRSNNELDA AKLKKEFPEL LSIKDSLIKY VFEPNQKVKA
301: QV
001: MVADANGSSS SSFNFLIYGK TGWIGGLLGK LCEAQGITYT YGSGRLQDRQ SIVADIESVK PSHVFNAAGV TGRPNVDWCE SHKVETIRTN VAGTLTLADI
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
101: CREKGLVLIN YATGCIFEYD SGHPLGSGIG FKEEDTPNFT GSFYSKTKAM VEELLKNYEN VCTLRVRMPI SSDLTNPRNF ITKIARYEKV VDIPNSMTIL
201: DELLPISIEM AKRNLTGIYN FTNPGVVSHN EILEMYRDYI DPSFTWKNFT LEEQAKVIVA PRSNNELDAT KLKTEFPELM SIKESLIKFV FEPNKKTEVK
301: A
Arabidopsis Description
NRS/ERBifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ04]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.