CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 4
golgi 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59194	Soybean	golgi, mitochondrion	94.71	94.71
KRH11871	Soybean	golgi, plastid	86.54	86.75
KRH36892	Soybean	golgi, mitochondrion	86.54	86.75
AT2G34850.2	Thale cress	cytosol	48.56	85.59
Solyc07g043550.2.1	Tomato	cytosol, unclear	60.58	83.44
CDY71965	Canola	cytosol, mitochondrion	47.36	82.77
PGSC0003DMT400080637	Potato	golgi	77.64	80.75
CDY09555	Canola	mitochondrion	81.49	80.71
Bra032409.1-P	Field mustard	mitochondrion	81.25	80.67
CDX82768	Canola	mitochondrion	79.57	80.54
CDY02312	Canola	mitochondrion	81.25	80.48
AT1G30620.4	Thale cress	golgi, mitochondrion	81.01	80.43
CDX78998	Canola	mitochondrion	79.33	80.29
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	80.05	79.86
PGSC0003DMT400054459	Potato	mitochondrion	79.81	79.62
Solyc02g030230.2.1	Tomato	mitochondrion	79.33	79.33
AT4G20460.1	Thale cress	golgi, mitochondrion	78.37	79.32
GSMUA_Achr11P...	Banana	cytosol, golgi	74.28	79.03
VIT_03s0017g00980.t01	Wine grape	golgi	79.09	78.9
CDY29113	Canola	golgi	77.64	78.4
Bra027557.1-P	Field mustard	golgi	77.64	78.4
Os04t0618200-02	Rice	golgi	73.56	78.26
CDY13102	Canola	golgi	77.4	78.16
Bra033746.1-P	Field mustard	golgi	77.4	78.16
CDY52524	Canola	golgi	79.57	78.07
CDY31644	Canola	golgi	79.57	78.07
CDY49498	Canola	golgi	77.16	77.91
CDY49015	Canola	golgi	77.16	77.91
Bra020917.1-P	Field mustard	golgi, mitochondrion	76.68	77.62
Os08t0129700-01	Rice	mitochondrion	75.72	77.59
PGSC0003DMT400041159	Potato	golgi, mitochondrion	72.12	77.32
EER95001	Sorghum	mitochondrion	75.48	77.15
TraesCS7D01G307500.1	Wheat	golgi, mitochondrion	75.0	77.04
HORVU7Hr1G074300.2	Barley	golgi	74.76	76.79
GSMUA_Achr3P23390_001	Banana	mitochondrion	76.92	76.74
GSMUA_Achr11P...	Banana	mitochondrion	76.68	76.5
HORVU2Hr1G104110.1	Barley	mitochondrion, plastid	75.72	76.46
TraesCS2A01G460400.1	Wheat	unclear	75.72	76.46
GSMUA_Achr4P31860_001	Banana	mitochondrion	76.44	76.44
TraesCS7A01G311100.1	Wheat	golgi	74.28	76.3
GSMUA_Achr8P33320_001	Banana	mitochondrion	76.44	76.26
TraesCS2B01G482000.1	Wheat	golgi	75.48	76.21
TraesCS2D01G460600.1	Wheat	mitochondrion, plastid	75.48	76.21
KXG27129	Sorghum	mitochondrion, plastid	75.96	76.14
TraesCS7B01G210700.2	Wheat	golgi	75.0	75.54
Solyc12g006410.1.1	Tomato	unclear	72.12	75.19
TraesCS5A01G291300.1	Wheat	golgi	75.72	74.82
TraesCS5D01G298700.1	Wheat	mitochondrion	75.72	74.82
Os07t0139400-01	Rice	plasma membrane	75.72	74.82
TraesCS5B01G290300.1	Wheat	mitochondrion	75.24	74.35
HORVU5Hr1G077110.3	Barley	mitochondrion	75.24	74.35
AT5G44480.1	Thale cress	mitochondrion	77.4	73.85
Bra005387.1-P	Field mustard	golgi, mitochondrion	80.05	73.35
EER95854	Sorghum	mitochondrion, plastid	75.72	73.26
Bra013466.1-P	Field mustard	mitochondrion	77.88	69.98
KRH60045	Soybean	extracellular	36.3	43.14
KRH41316	Soybean	extracellular, golgi	35.58	42.29
KRH51264	Soybean	plastid	34.86	41.31
KRH59827	Soybean	extracellular, golgi	33.41	39.71
KRH41129	Soybean	nucleus	32.45	38.57
KRH77652	Soybean	plastid	35.82	38.11
KRH27832	Soybean	plastid	35.34	37.89
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	30.77	36.99
Zm00001d017999_P002	Maize	mitochondrion	27.4	36.66
KRG99450	Soybean	cytosol, mitochondrion, nucleus	6.01	36.23
KRH00406	Soybean	cytosol, mitochondrion, nucleus	6.01	36.23
KRH26241	Soybean	cytosol	4.57	35.85
KRH72376	Soybean	endoplasmic reticulum, mitochondrion	23.8	22.97
KRH02967	Soybean	nucleus	23.56	22.74
KRH40009	Soybean	plastid	21.39	21.87
KRH04016	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	22.6	21.86
KRH57292	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	22.36	21.68
KRH58854	Soybean	endoplasmic reticulum, golgi	21.63	21.63
KRH76209	Soybean	endoplasmic reticulum, plastid	22.6	21.46
KRH65316	Soybean	cytosol, endoplasmic reticulum, golgi, plastid	22.36	21.23
KRG97348	Soybean	endoplasmic reticulum	21.15	20.05
KRH31569	Soybean	mitochondrion	22.12	19.91
KRH42756	Soybean	extracellular, golgi, plastid	21.88	18.46
KRH46062	Soybean	cytosol	19.95	13.56
KRH04933	Soybean	cytosol, mitochondrion, plastid	20.67	13.35
KRG98907	Soybean	cytosol, mitochondrion, peroxisome	20.67	13.03
KRH16155	Soybean	cytosol	20.43	12.98
KRH43408	Soybean	nucleus	20.67	12.87
KRH13001	Soybean	cytosol, mitochondrion, plastid	20.67	12.87
KRH21867	Soybean	cytosol, mitochondrion, plastid	20.43	12.71
KRH27429	Soybean	cytosol, mitochondrion, plastid	20.43	12.71
KRH57264	Soybean	endoplasmic reticulum	3.12	6.22
KRH03995	Soybean	plastid	3.61	4.97
KRH77471	Soybean	cytosol, endoplasmic reticulum	3.12	4.68
KRH57441	Soybean	cytosol	2.4	3.22

Protein Annotations

KEGG:00052+5.1.3.2	KEGG:00520+5.1.3.2	EntrezGene:100792055	MapMan:3.13.7.1	Gene3D:3.40.50.720	Gene3D:3.90.25.10
EMBL:ACUP02004844	EnsemblPlantsGene:GLYMA_08G128500	GO:GO:0003674	GO:GO:0003824	GO:GO:0003978	GO:GO:0005975
GO:GO:0006012	GO:GO:0008150	GO:GO:0008152	GO:GO:0016853	UniProt:K7L6B6	EnsemblPlants:KRH43065
ProteinID:KRH43065	ProteinID:KRH43065.1	ProteinID:KRH43066.1	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF16363
PANTHER:PTHR43349	PANTHER:PTHR43349:SF14	MetaCyc:PWY-3821	MetaCyc:PWY-6317	MetaCyc:PWY-6397	MetaCyc:PWY-6527
MetaCyc:PWY-7328	MetaCyc:PWY-7344	SUPFAM:SSF51735	TIGRFAMs:TIGR01179	InterPro:UDP_G4E	UniParc:UPI000233926B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:9900476..9906746

Molecular Weight (calculated)

45727.9 Da

IEP (calculated)

9.345

GRAVY (calculated)

-0.279

Length

416 amino acids

Sequence
(BLAST)

001: MLNFGRSRSQ SRAARATTMG GMDYADSKKK GNFVGKVFLA AALTTLCIIM IKRSPSLNSP SPFSVREPGV THVLVTGGAG YIGSHAALRL LKENYRVTIV
101: DNLSRGNLGA VKVLQDLFPE PGRLQFIYAD LGDPQSVNKI FLENKFDAVM HFAAVAYVGE STADPLKYYH NITSNTVLVL ESMAKHDVKT LIYSSTCATY
201: GEPEKMPITE ETKQVPINPY GKAKKMAEEI ILDLSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREQ GRISGACFDA ARGIVPGLKV RGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL EKAQPSNVGI YNVGTGKGSS VKEFVEACKK ATGVDIKVDY LPRRPGDYAE VYSDPSKIKR ELNWVAKHTD LQQSLKVAWR
401: WQKSHRDGYG VSNALF

Best Arabidopsis Sequence Match ( AT1G30620.1 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQI KGTDYKTADG
301: TCVRDYIDVT DLVDAHVKAL QKAKPRKVGI YNVGTGKGSS VKEFVEACKK ATGVEIKIDY LPRRAGDYAE VYSDPSKIRK ELNWTAKHTN LKESLETAWR
401: WQKLHRNGYG LTTSSVSVY

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.