Factsheet for Zm00001d017999_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, nucleus
MultiLoc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010657_P001	Maize	golgi, plastid, vacuole	64.95	58.38
CDY71965	Canola	cytosol, mitochondrion	25.4	33.19
AT2G34850.2	Thale cress	cytosol	24.76	32.63
Solyc07g043550.2.1	Tomato	cytosol, unclear	31.19	32.12
CDY09555	Canola	mitochondrion	40.51	30.0
Bra032409.1-P	Field mustard	mitochondrion	40.19	29.83
CDY02312	Canola	mitochondrion	40.19	29.76
AT1G30620.4	Thale cress	golgi, mitochondrion	39.87	29.59
Solyc02g030230.2.1	Tomato	mitochondrion	39.55	29.57
CDY13102	Canola	golgi	38.91	29.37
CDY29113	Canola	golgi	38.91	29.37
PGSC0003DMT400080637	Potato	golgi	37.62	29.25
Bra027557.1-P	Field mustard	golgi	38.59	29.13
VIT_03s0017g00980.t01	Wine grape	golgi	38.59	28.78
Solyc02g069580.2.1	Tomato	golgi, mitochondrion	38.59	28.78
AT4G20460.1	Thale cress	golgi, mitochondrion	37.94	28.71
CDY52524	Canola	golgi	38.91	28.54
CDY31644	Canola	golgi	38.91	28.54
CDX78998	Canola	mitochondrion	37.62	28.47
Zm00001d047683_P003	Maize	mitochondrion	38.59	28.3
PGSC0003DMT400054459	Potato	mitochondrion	37.94	28.3
CDX82768	Canola	mitochondrion	37.3	28.22
Bra020917.1-P	Field mustard	golgi, mitochondrion	37.3	28.22
KRH11871	Soybean	golgi, plastid	37.62	28.19
CDY49015	Canola	golgi	37.3	28.16
Bra033746.1-P	Field mustard	golgi	37.3	28.16
PGSC0003DMT400041159	Potato	golgi, mitochondrion	35.05	28.09
KRH36892	Soybean	golgi, mitochondrion	37.3	27.95
CDY49498	Canola	golgi	36.98	27.91
Zm00001d028825_P001	Maize	golgi, mitochondrion	37.62	27.73
KRH59194	Soybean	golgi, mitochondrion	36.98	27.64
KRH43065	Soybean	golgi, mitochondrion, plastid	36.66	27.4
AT5G44480.1	Thale cress	mitochondrion	37.94	27.06
Bra005387.1-P	Field mustard	golgi, mitochondrion	39.23	26.87
Solyc12g006410.1.1	Tomato	unclear	34.41	26.82
Bra013466.1-P	Field mustard	mitochondrion	37.94	25.49
Zm00001d002292_P004	Maize	endoplasmic reticulum, golgi	36.01	24.62
Zm00001d026311_P001	Maize	golgi, mitochondrion, plastid	38.59	23.76
Zm00001d020093_P002	Maize	golgi	16.08	16.56
Zm00001d005598_P001	Maize	plastid	18.01	15.34
Zm00001d029151_P002	Maize	extracellular, golgi	17.04	14.93
Zm00001d021249_P003	Maize	cytosol	16.4	14.05
Zm00001d032346_P002	Maize	endoplasmic reticulum, golgi, plastid	18.01	13.24
Zm00001d049804_P001	Maize	plasma membrane	11.9	8.26
Zm00001d031577_P001	Maize	cytosol, endoplasmic reticulum, peroxisome, plastid	11.58	8.0
Zm00001d018350_P001	Maize	plasma membrane	11.25	7.97
Zm00001d021026_P001	Maize	endoplasmic reticulum	12.22	7.8
Zm00001d045078_P001	Maize	extracellular, golgi	10.29	7.75
Zm00001d037087_P001	Maize	endoplasmic reticulum	10.93	7.73
Zm00001d028427_P001	Maize	plastid	11.9	7.72
Zm00001d047915_P001	Maize	plastid	11.9	7.72
Zm00001d014509_P001	Maize	cytosol	5.79	6.27
Zm00001d037784_P002	Maize	endoplasmic reticulum	12.22	5.46
Zm00001d028654_P002	Maize	cytosol	11.58	5.36
Zm00001d047796_P003	Maize	extracellular, nucleus, plasma membrane	11.58	5.36
Zm00001d034293_P001	Maize	plastid	3.54	4.98
Zm00001d037310_P001	Maize	plastid	4.18	4.28
Zm00001d017794_P001	Maize	plastid	4.5	3.75
Zm00001d038116_P001	Maize	plastid	3.86	3.7
Zm00001d017601_P001	Maize	extracellular, peroxisome	1.29	1.3

Protein Annotations

EnsemblPlants:Zm00001d017999_P002	EnsemblPlants:Zm00001d017999_T002	EnsemblPlantsGene:Zm00001d017999	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR43349
PANTHER:PTHR43349:SF18	ProteinID:AQK74758.1	SUPFAM:SSF51735	UniParc:UPI0008450EB0	UniProt:A0A1D6HJX5	MapMan:35.1

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr5:-:211662059..211668326

Molecular Weight (calculated)

34500.0 Da

IEP (calculated)

9.572

GRAVY (calculated)

-0.124

Length

311 amino acids

Sequence
(BLAST)

001: MARLVLRLRE DHRACVLGRR VEALQARVYA LELRNRECYE ATAAWEAEVQ WLSAENHRLA DQAMMARRKR KDGGGHAALF ASYNVHLLAA LVLQRGSLSL
101: SAVIVEMQPG SKNILVISDS SGSKMGKERA FCAGGDLAAL VRSTVSYTEG TWCSTDHSST YSPGCILWIP GYKNIIAYCG YYRNITANTL AVLEAMAAHN
201: FPINPYGKAK KMAEDIILDF SKLKKSNMMA VMILRYFNVI GSDPKGRLGE APIHELRKHG RISGACFDAT LGIIPGLKEC KAVVVPRTIC YQNKKDESGW
301: WPRLLKKDLC S

Best Arabidopsis Sequence Match ( AT1G30620.5 )
(BLAST)

001: MFSFGRARSQ GRQNRSMSLG GLDYADPKKK NNYLGKILLT ASLTALCIFM LKQSPTFNTP SVFSRHEPGV THVLVTGGAG YIGSHAALRL LKESYRVTIV
101: DNLSRGNLAA VRILQELFPE PGRLQFIYAD LGDAKAVNKI FTENAFDAVM HFAAVAYVGE STQFPLKYYH NITSNTLVVL ETMAAHGVKT LIYSSTCATY
201: GEPDIMPITE ETPQVPINPY GKAKKMAEDI ILDFSKNSDM AVMILRYFNV IGSDPEGRLG EAPRPELREH GRISGACFDA ARGIMPGLQF WSGS

Arabidopsis Description

MUR4UDP-arabinose 4-epimerase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA77]
SUBAcon: [mitochondrion,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.