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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome

Predictor Summary:
  • mitochondrion 2
  • endoplasmic reticulum 1
  • plastid 1
  • cytosol 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, peroxisome, plastid
Any Predictor:endoplasmic reticulum, mitochondrion, peroxisome, plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d004812_P002
Zm00001d023560_P002
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G23820.1 Zm00001d004812_P002 AT4G09570.1 19130088
AT3G23820.1 Zm00001d023560_P002 AT4G09570.1 19130088
AT3G23820.1 Zm00001d053016_P002 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d049804_P001 Maize plasma membrane 84.44 84.82
EES14210 Sorghum cytosol, extracellular, golgi, plastid 89.11 83.72
Zm00001d021026_P001 Maize endoplasmic reticulum 81.78 75.56
TraesCS7B01G153900.1 Wheat plastid 82.22 75.2
TraesCS7D01G257800.1 Wheat plastid 81.78 75.1
TraesCS7A01G256600.1 Wheat plastid 81.11 74.49
HORVU7Hr1G053260.2 Barley plastid 80.0 73.47
GSMUA_AchrUn_... Banana endoplasmic reticulum 63.11 64.11
GSMUA_Achr8P00950_001 Banana cytosol, endoplasmic reticulum, golgi 63.11 64.11
GSMUA_Achr8P08790_001 Banana endoplasmic reticulum, nucleus, peroxisome 61.78 62.61
KRH58854 Soybean endoplasmic reticulum, golgi 56.0 60.58
Zm00001d045078_P001 Maize extracellular, golgi 55.11 60.05
VIT_05s0029g00420.t01 Wine grape endoplasmic reticulum 59.11 58.98
GSMUA_Achr7P02740_001 Banana endoplasmic reticulum 63.11 58.56
PGSC0003DMT400053071 Potato cytosol, endoplasmic reticulum, golgi, plastid 58.22 58.48
Solyc09g092330.1.1 Tomato nucleus 58.67 58.41
CDX77481 Canola endoplasmic reticulum 58.44 58.06
Bra014987.1-P Field mustard endoplasmic reticulum 58.44 57.93
CDX85133 Canola endoplasmic reticulum 58.44 57.68
KRG97348 Soybean endoplasmic reticulum 56.22 57.63
Zm00001d018350_P001 Maize plasma membrane 56.22 57.63
Zm00001d037087_P001 Maize endoplasmic reticulum 56.22 57.5
CDY64583 Canola endoplasmic reticulum 58.44 57.17
CDY18087 Canola cytosol, endoplasmic reticulum, golgi 58.44 57.17
Bra028348.1-P Field mustard endoplasmic reticulum, golgi, nucleus 58.44 57.17
PGSC0003DMT400040718 Potato cytosol, endoplasmic reticulum, golgi 55.11 57.14
Bra001923.1-P Field mustard cytosol, endoplasmic reticulum, golgi 57.56 56.8
KRH31569 Soybean mitochondrion 58.22 56.71
AT3G23820.1 Thale cress endoplasmic reticulum 57.78 56.52
PGSC0003DMT400011867 Potato cytosol, endoplasmic reticulum, golgi 56.89 56.39
CDX92990 Canola endoplasmic reticulum 57.11 56.36
Solyc05g053790.1.1 Tomato cytosol, endoplasmic reticulum, golgi 54.22 56.35
CDY53207 Canola endoplasmic reticulum 56.89 56.26
Zm00001d028427_P001 Maize plastid 56.89 53.44
Zm00001d047915_P001 Maize plastid 56.67 53.24
KRH42756 Soybean extracellular, golgi, plastid 57.56 52.54
Zm00001d034293_P001 Maize plastid 18.22 37.1
Zm00001d037310_P001 Maize plastid 23.56 34.87
Zm00001d038116_P001 Maize plastid 21.78 30.25
Zm00001d017794_P001 Maize plastid 22.89 27.61
Zm00001d021249_P003 Maize cytosol 21.33 26.45
Zm00001d005598_P001 Maize plastid 20.89 25.75
Zm00001d029151_P002 Maize extracellular, golgi 19.78 25.07
Zm00001d020093_P002 Maize golgi 14.67 21.85
Zm00001d032346_P002 Maize endoplasmic reticulum, golgi, plastid 20.44 21.75
Zm00001d028825_P001 Maize golgi, mitochondrion 18.67 19.91
Zm00001d047683_P003 Maize mitochondrion 18.22 19.34
Zm00001d026311_P001 Maize golgi, mitochondrion, plastid 19.56 17.43
Zm00001d002292_P004 Maize endoplasmic reticulum, golgi 17.33 17.14
Zm00001d028654_P002 Maize cytosol 20.89 13.99
Zm00001d047796_P003 Maize extracellular, nucleus, plasma membrane 20.89 13.99
Zm00001d037784_P002 Maize endoplasmic reticulum 20.67 13.36
Zm00001d017999_P002 Maize mitochondrion 8.0 11.58
Zm00001d010657_P001 Maize golgi, plastid, vacuole 8.89 11.56
Zm00001d014509_P001 Maize cytosol 6.67 10.45
Zm00001d017601_P001 Maize extracellular, peroxisome 3.33 4.89
Protein Annotations
EntrezGene:103642738MapMan:3.13.4.1Gene3D:3.40.50.720UniProt:A0A1D6KJQ5InterPro:Epimerase_deHydtaseGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016021GO:GO:0016857GO:GO:0050662InterPro:NAD(P)-bd_dom_sfInterPro:Nuc_sugar_epim
ProteinID:ONM03162.1PFAM:PF01370PRINTS:PR01713PANTHER:PTHR43574PANTHER:PTHR43574:SF7SUPFAM:SSF51735
TMHMM:TMhelixUniParc:UPI000222012AEnsemblPlantsGene:Zm00001d031577EnsemblPlants:Zm00001d031577_P001EnsemblPlants:Zm00001d031577_T001SEG:seg
Description
UDP-glucuronate 4-epimerase 1
Coordinates
chr1:-:195092276..195093628
Molecular Weight (calculated)
47721.2 Da
IEP (calculated)
10.624
GRAVY (calculated)
0.009
Length
450 amino acids
Sequence
(BLAST)
001: MPAGVVDAAA KGVRPERRAA GAKKQLVSAS SHLLFRATVL ATIALVVLFA AHYPSLLSRS YILSAAAYGR GAASWEREVR RSAAPRRDGA LSVLVTGAAG
101: FVGLHCSLAL SARGDGVVGL DNFNAYYDPS LKRARQRLLA SRGVLVLDGD VNDAALLERL LAAARITHVL HLAAQAGVRH ALRAPQAYVA ANVAGLVALL
201: EAAARHADPQ PALVWASSSS VYGLNDDAPF SEDHRTDRPA SLYAATKKAG EAIAHAYNHI YGLSITGLRF FTVYGPWGRP DMAYFSFARS IVAGEPVTLF
301: RAADGAVARR DFTYVDDVVR GCLGALDTAG KSTGSRSGKK RGPAPLRVYN LGNTSPVPVT HMLAILEKLL GRKARKRVVT MPSNGDVPFT HANVSHAARD
401: LGYRPATSLE AGLRHFVDWF VRYYKVDVGG GSADAGKTAK RKSMPTSAAS
Best Arabidopsis Sequence Match ( AT1G02000.1 )
(BLAST)
001: MSHLDDIPST PGKFKMMDKS PFFLHRTRWQ SSVAKLAFWS LVFFGLLFIF FYRSPISNPD SSRRSLRTYS WGGPAWEKRV RSSARVRTRN GVSVLVTGAA
101: GFVGTHVSAA LKRRGDGVLG LDNFNDYYDT SLKRSRQALL ERSGVFIVEG DINDLSLLKK LFEVVPFTHV MHLAAQAGVR YAMENPGSYV HSNIAGFVNL
201: LEVCKSANPQ PAIVWASSSS VYGLNTKVPF SEKDRTDQPA SLYAATKKAG EEIAHTYNHI YGLSLTGLRF FTVYGPWGRP DMAYFFFTRD ILKGKAISIF
301: EGANHGTVAR DFTYIDDIVK GCLGALDTAE KSTGSGGKKR GAAQLRVFNL GNTSPVPVTD LVSILERLLK VKAKRNMMKL PRNGDVPFTH ANISSAQREF
401: GYKPSTDLQT GLKKFVRWYL GYYKQGGKKV AAAA
Arabidopsis Description
GAE2UDP-glucuronate 4-epimerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPC1]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.